Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1980 ATGGAGCCCCTCTTCCCTTCCGAATTGCAATTCCCGAGCTGCTGGGCGAATATGCCAATGGCATCTTCTTCAGACTCATGGATGAAAGAATATAATGAAGCAGTGAAACTTGCTGATGATATCAGTGGCATGATTTCTGAGCGGAGTTCATTTCCTGCTTCTGGACCAGAAACCCAGCGTCATGCATCTGCAATAAGAAGGAAGATTACGATATTGGGGACCAGACTTGATAGCTTGCTGTCCCTTCTGTCGAAACTTCCTGGAAAGCAACCTGTGACTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTGCAAATCTAAGATCAAAAGTTAACCAAATGGCTTCTACGCTGAACATGTCAAACTTTGCAAACAGAGATAGTTTGCTTGGGCCAGAAATCAAACCAGCTGATACAGTGAGCCGAACTGTTGGCCTGGACAACAGTGGACTTGTTGGATTTCAACGGCAAATCATGAGAGAACAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTGATAAGTACGAAGCATATTGCATTGGCAGTGAATGAAGAACTGGATCTACACACTAGACTTATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGTTGCGGCGAGTGCAAAAGAACTTGGCAATTTTGAATAAACGTACCAAGGGTGGCTGTTCCTGCTTAGGCATGCTTTTATCAGTTATTGGTATTGTGGTCTTGGTGCTTGTTATATGGTTGTTGGTCAAATATTTGTAA 759 0.4374 MEPLFPSELQFPSCWANMPMASSSDSWMKEYNEAVKLADDISGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLLSLLSKLPGKQPVTEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPADTVSRTVGLDNSGLVGFQRQIMREQDEGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLGMLLSVIGIVVLVLVIWLLVKYL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1980 252 SMART tSNARE_6 151 218 IPR000727 -
Glsi10g1980 252 CDD SNARE_Qc 159 216 - -
Glsi10g1980 252 PANTHER SYNTAXIN 54 240 IPR045242 -
Glsi10g1980 252 FunFam syntaxin-51 isoform X2 158 220 - -
Glsi10g1980 252 Pfam SNARE domain 193 244 IPR000727 -
Glsi10g1980 252 SUPERFAMILY SNARE fusion complex 147 217 - -
Glsi10g1980 252 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 156 218 IPR000727 -
Glsi10g1980 252 Gene3D - 158 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1980 Glsi-ChrGlsi10 14042697 14049093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1980 20 252 SNARE and Associated Proteins AT1G16240 73.391 8.50e-129 362