Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1958 ATGGAGTCCATGGCAGGGGATTACGATGCATCTCGGATTCTTGCTGAACTTAAGTCGTTGAAGGACACAAAGAGCACTATAGAGCACAAAATCTCAGTTCTTGAAGCTCAGCTCCTTGAGATTAATCTCCGAAACGAGGTTGCGAACAATGGCTCTTGCCCTCCTATTTCTACTTTCAATTTGGACCCCGCAAACGGATTGTCCCCTGATATGATTTACAGATACAGTCGCCACCTCTTGCTTCCTTCCTTCGGGGTTGAAGGGCAGGCAAATCTCTTGAAGTCATCAATATTAGTCGTGGGAGCTGGAGGTTTGGGTTCTCCTGCATTGTTATACCTCGCAGCTTCTGGTGTTGGTCGCCTGGGTATTGTTGATCATGACCTGGTTGAGCTGAATAATATGCATAGGCAGATAATTCACACTGAAACATATATTGGTCAGCCAAAAGTAAAATCTGCTGCTGCTGCTTGTCGCTCGATCAACTCCTCCATTCAAATTGTGGAACATAAAGAAGCTTTGCGGACTTCCAATGCCTTAGAAATCCTTAGTCAATACGATATAATTGTAGATGCAACAGATAATGCTCCAAGCCGCTACATGATCAGCGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCCGGTGCTGCACTAGGATTAGAAGGCCAGCTCACTGTCTACAATTACAAAGGTGGTCCTTGCTATAGATGTCTGTTTCCAACTCCACCACCTACAACAGCTTGTCAAAGATGTGCTGATAGCGGAGTTCTAGGAGTAGTTCCTGGTGTAATTGGCTGTCTCCAAGCTTTAGAGGCCATTAAGATTGCAAGTGTCGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTTGATGCATTGTCTGCACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCAATGTGAAGCTTGTGGAGAGGATGCAACATTTACTCAACAGCAATTTCAAGAATTTGATTATGAGAAATTTACTCAGACTCCATTGTCTACATCTCCTTTGAAGTTAAATCTTATTCCCACTGAATCAAGAATCAGCAGCAAGGAGTACTGCGAAAGAATCCGTATCAAGGAACCCCATGTTCTGGTGGACGTGAGACCAGCTCACCATTTCAAGATTGTGTCTCTTCCAAAGTCCTTGAACATTCCACTCTCAACTTTGGAGGCTAGATTGCCTGAAATATCATCAGCTTTGAAGACACAGGAAGAGGGTGCTTCCAGTGCACACTTGTATGTAGTATGCAGAAGGGGAAATGATTCTCAGATGGCTGTTCAGTATCTTCAAAAGATGGGTTTTACTTCTGCCAAGGACATTATTGGGGGTTTGGAATCTTGGGCTAAGGATGTGGATTCAAACTTCCCCTCATATTAG 1392 0.4397 MESMAGDYDASRILAELKSLKDTKSTIEHKISVLEAQLLEINLRNEVANNGSCPPISTFNLDPANGLSPDMIYRYSRHLLLPSFGVEGQANLLKSSILVVGAGGLGSPALLYLAASGVGRLGIVDHDLVELNNMHRQIIHTETYIGQPKVKSAAAACRSINSSIQIVEHKEALRTSNALEILSQYDIIVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGVIGCLQALEAIKIASVVGEPLSGRMLLFDALSARIRIVKIRGRSMQCEACGEDATFTQQQFQEFDYEKFTQTPLSTSPLKLNLIPTESRISSKEYCERIRIKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLEARLPEISSALKTQEEGASSAHLYVVCRRGNDSQMAVQYLQKMGFTSAKDIIGGLESWAKDVDSNFPSY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1958 463 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 71 359 IPR045886 -
Glsi10g1958 463 Gene3D - 350 463 IPR036873 -
Glsi10g1958 463 Coils Coil 17 37 - -
Glsi10g1958 463 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 34 463 IPR028885 GO:0002143|GO:0004792|GO:0005829
Glsi10g1958 463 SMART rhod_4 353 458 IPR001763 -
Glsi10g1958 463 CDD ThiF_MoeB_HesA_family 74 302 - -
Glsi10g1958 463 Gene3D - 69 318 - -
Glsi10g1958 463 FunFam Adenylyltransferase and sulfurtransferase MOCS3 68 317 - -
Glsi10g1958 463 FunFam Adenylyltransferase and sulfurtransferase MOCS3 350 463 - -
Glsi10g1958 463 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 65 430 IPR035985 GO:0008641
Glsi10g1958 463 ProSiteProfiles Rhodanese domain profile. 363 461 IPR001763 -
Glsi10g1958 463 Pfam Rhodanese-like domain 357 454 IPR001763 -
Glsi10g1958 463 Pfam ThiF family 75 310 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1958 Glsi-ChrGlsi10 13879681 13884473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1958 118 463 Sulfurtransferasese or Rhodanese AT5G55130 74.148 0.0 549