Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1952 ATGCAAACATCTGAGAAACATAAACTTTCCTATGGCTCTGGCAGTTTCTATATTGAGCCTGTACAAATGCTGGAGTCATTTTATTACCTGCCTCCGAGTGAGACCGTAGAAAATCACTCATCCTCCAATAACAGCAGCCTATCAGCCAACCCCCCAGTTCATCAGACCGCGGAACAATATTGCACCCTTGAATCATCCTCAACAAGTAATAGTAACCCTTCCCACAATTCTCCATCTCCTGTCAGTTTCTCCCCTGATGGTAGCCCAGTTTCAAAACCGGAGTCAAAACCATATGCGTTGAGGCCACAGCATTCTGTTGACTTCAACAATAGATCGCCAGAGAATGAATCTTGCTTGACATTGACACATGACCTTGATGACCTTGATGACCTTAGGCACAAGATAAGAGAGCTTGAAACTGCAATGCTGGGACCTGATGCAGATATTTTTGACATATATAATGCTGCAATTCCTGAGGAATCTGATCCAATTGTGTCAGAGGCAGAGAAGTGGAAGAAAATGATGGAGATGATATCAAGAGGGGATTTGAAGGATCTGCTTTGTGCTTGTGCAAATGCAATGGCAGGAAATGATATGGAGACTTGTGAATATCTGATGTCAGAGTTGCGAAAAATGGTGTCCATTTCAGGCAACCCACTCCAACGTTTGGGAGCATACCTGTTGGAGGCTCTTGTGGCAAGGTTGGCCTCTTCAGGAAGCGCAATCTACAAATCCTTGAAATGTAAAGAGCCTACAGGTCCTGAACTCCTTTCTTACATGCACATACTTTATGAAATCTGCCCATACTTCAAGTTTGGCTATATGTCAGCCAATGGGGCAATTGCTGAAGCCATAAAGGACGAAAATAGAGTCCATATAATTGATTTTCAGATTAATCAGGGCATCCAGTGGGTGAGCCTCATCCAGGCTCTTGCTCACCGGCCGGGAGGTCCTCCGGAGATTAGAATAACTGGTGTTGATGACCCTACTTCGGCTTATGCCCGTGGAGGGGGGATTGATATGGTGGGAAAAAGGTTGTCAAGACTTGCAGAGTCATGTAAAGTACCCTTTGAATTCCAAGCTGTAGGAGTTGCTGCTTCCAAGATACAACTCAAAGACCTCGAGTTTCGCACAGGTGAAGCTGTTGCTGTGAATTTTGCCATGATACTGCACCATGTGCCAGATGAAACAATAGACAGTCAGAATCATCGAGACCGATTGTTAAGACTGGTAAAGTGCTTGTCCCCAAAGGTAGTGACTCTCGTGGAACAAGAATCTGAAACTAATAATGCCCCATTCTTCCCACGATTCGTTGAGACATTGAACTATCACTTGGCTGTTTTTGAATCAATTGATGCTGTTCTGCCAAGGGACGATAGAGAGAGGATCAATGTGGAACAGCACTGTTTGGCTCGAGAAATTGTTAACTTAATTGCATGCGAAGGAGAAGAAAGAGTGGAACGACATGAGCCTCTAAGAAAGTGGAGATCCCGTTTCACAATGGCTGGGTTTACACCATATCCACTGAGCTCCTTTTTCAATTCAACCATCAAGAATCTGCTGGAGAACTACAGCAGAAATTACACTCTAGAAGAGAGAGATGGTGCTCTATGCCTTGGTTGGATGAATCAAGCTCTTGTTACCTCTTGTGCTTGGAGGTGA 1662 0.444 MQTSEKHKLSYGSGSFYIEPVQMLESFYYLPPSETVENHSSSNNSSLSANPPVHQTAEQYCTLESSSTSNSNPSHNSPSPVSFSPDGSPVSKPESKPYALRPQHSVDFNNRSPENESCLTLTHDLDDLDDLRHKIRELETAMLGPDADIFDIYNAAIPEESDPIVSEAEKWKKMMEMISRGDLKDLLCACANAMAGNDMETCEYLMSELRKMVSISGNPLQRLGAYLLEALVARLASSGSAIYKSLKCKEPTGPELLSYMHILYEICPYFKFGYMSANGAIAEAIKDENRVHIIDFQINQGIQWVSLIQALAHRPGGPPEIRITGVDDPTSAYARGGGIDMVGKRLSRLAESCKVPFEFQAVGVAASKIQLKDLEFRTGEAVAVNFAMILHHVPDETIDSQNHRDRLLRLVKCLSPKVVTLVEQESETNNAPFFPRFVETLNYHLAVFESIDAVLPRDDRERINVEQHCLAREIVNLIACEGEERVERHEPLRKWRSRFTMAGFTPYPLSSFFNSTIKNLLENYSRNYTLEERDGALCLGWMNQALVTSCAWR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1952 553 MobiDBLite consensus disorder prediction 33 113 - -
Glsi10g1952 553 MobiDBLite consensus disorder prediction 33 89 - -
Glsi10g1952 553 Pfam GRAS domain family 183 553 IPR005202 -
Glsi10g1952 553 ProSiteProfiles GRAS family profile. 174 553 IPR005202 -
Glsi10g1952 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 547 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1952 Glsi-ChrGlsi10 13853693 13855354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1952 1 553 GRAS Transcription Factor Family AT1G50600 57.092 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi10g1952 GRAS 5.2e-134 CL0063