Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1938 ATGGGGTCCATGACATATCTCTGGCCGTGCAATTTACCATATTGTCCTATAAAGTTTGGCTATAAACAGTCCACCCTGATATCAAGTCTCATCATGGAGTTTTTGGAGATCCTTTACTCTATCCTCTTTGCCTTCTTTTTCTTCCTCCTTATTATATTCAAATCCAAGTCCAGAAAGCCCACCAAAACCCTTCCCCCAGGACCATGGAAACTCCCTCTGATAGGGCACATGCACCACTTTTTAGGGTCACTACCCCATCACTCTTTGAGAAACTTGGCAAACAAACATGGACCTTTGATGCACCTTCAACTTGGAGAGACATCCAATGTCATAGTCTCTTCCCCAGAAGCCACCAAAGAGGTCATGAAAACTCATGATGCTATCTTTGCCAATAGACCCTATCTTTTTGCTTATGAAGTTCTTTCTTACAATGCCACAAATATTGCCTTCTCCTCCTATGGAAGTTACTGGTCGCAGCTAAGAAAAATATGCAGTGCAGAACTGCTATCTGCAAAACGGGTGCAATCATTCAGGTTCATAAGAGAAGAGGAGGTATCAGAACTGGTAAAAAAAATCTCTGCCAATGAAGGATCAGTTATGAATATTAGCAAGAACATCATGTCAATGACAAATGCAATACTAGCACGAGCAGCGTTTGGTGAAAGATCCAGAGACCAAGAGGCTTTTCTTAAATATGCTAAGGAGGCATTGAATCTAGCTGGGGGTTTCCATGTTGCTGACTTCTTTCCTTCCTTGAAAATACTGCCAGACATCACTGGGATGAAAGCTAAACTTGAAAGTGTGCACAGAGAGCTTGATAGAATACTAGAAAACATCATTAATGATCACAAAGAGAAGAAGAACGGAAGCTGTGGTGAGGTAGAAGAAGAAGATCTAGTTGATGTTTTTCTGAAGATTCAGCGGCAAAATGACCTGGAAATTCCCATATCTCTTGATAACATCAAAGCAGTCATTCTGGACATTTTCATTGGTGGAACTGAGACATCATCAACAACCGTAGTGTGGGCGATGTCAGAGATGCTAAAAAATCCGAAGACAATGGAAAAAGCACAAGCTGAGGTAAGAAGGGTTTTTAGAGACAAACCGTATGTGGATGAAGCAGAACTTCACCAACTGGAATACTTACAATCTGTCATCAAAGAAACCCTAAGGCTACACCCACCAGCTCCATTGCTACTTCCAAGGAAGAACAACCAAAGATGTGAGATCAATGGCTATGAAATACCTGCAAACACTATGATCCTTGTGAATGCTTGGGCAATAGGAAGAGATCCCAAGTATTGGACTGAAGCTGAGACTTTCAAACCAGAGAGATTCCTTAATAACCCTATTGGTTATAACTTTAGAGGGGCTACAAACTTTGAGTATATCCCATTTGGTGGTGGAAGGAGGATATGCCCAGGAATTGCTTTTGCCACACCCAATGTTGAGCTGCCACTTGCTAACTTGCTTTATCATTTTGATTGGAAGCTTCCTAATGGAATGAAGCTTGAAGAATTCGACGTGTCTGAGGCATTCGTTGGGAGTGTGAGGAAAAAATCAGATTTGTGCCTAATTCCTGTATCTTATCACCCTTAG 1599 0.4153 MGSMTYLWPCNLPYCPIKFGYKQSTLISSLIMEFLEILYSILFAFFFFLLIIFKSKSRKPTKTLPPGPWKLPLIGHMHHFLGSLPHHSLRNLANKHGPLMHLQLGETSNVIVSSPEATKEVMKTHDAIFANRPYLFAYEVLSYNATNIAFSSYGSYWSQLRKICSAELLSAKRVQSFRFIREEEVSELVKKISANEGSVMNISKNIMSMTNAILARAAFGERSRDQEAFLKYAKEALNLAGGFHVADFFPSLKILPDITGMKAKLESVHRELDRILENIINDHKEKKNGSCGEVEEEDLVDVFLKIQRQNDLEIPISLDNIKAVILDIFIGGTETSSTTVVWAMSEMLKNPKTMEKAQAEVRRVFRDKPYVDEAELHQLEYLQSVIKETLRLHPPAPLLLPRKNNQRCEINGYEIPANTMILVNAWAIGRDPKYWTEAETFKPERFLNNPIGYNFRGATNFEYIPFGGGRRICPGIAFATPNVELPLANLLYHFDWKLPNGMKLEEFDVSEAFVGSVRKKSDLCLIPVSYHP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1938 532 Pfam Cytochrome P450 65 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PANTHER CYTOCHROME P450 71B11-RELATED 49 528 - -
Glsi10g1938 532 Gene3D Cytochrome P450 57 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 CDD CYP71-like 95 523 - -
Glsi10g1938 532 FunFam Cytochrome P450 71D8 57 527 - -
Glsi10g1938 532 SUPERFAMILY Cytochrome P450 64 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Glsi10g1938 532 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 117 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1938 532 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1938 Glsi-ChrGlsi10 13727181 13731251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1938 38 528 Cytochrome P450 AT5G25120 41.283 2.25e-134 397