Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1930 ATGCATACTTCACAAGAACACAGTGACCTTGATTCCCCCCGGCTTACTGACAACAATATCAAAGCAGTTATCCTGGATATATTCGGCGCTGGAACTGATACATCATCAACAACCCTAGAGTGGGCAATGTCAGAAATGCTGAAAAACCCAGAAATTATGGAAAAAGCACAAGCTGAAGTAAGAAAAGTATTCGATAGAAAAGGGTATGTGAATGAAGTGGACCTTCAACAATTGAAATTCTTAAAGTTGGTCATCAAAGAAACCCTAAGGCTACACCCACCAGCAGCATTGCTACTTCCAAGAGAAAGCAGTGAGAAATGCAAAATCAATGGATATGAGATACCTGCTAAGACGAGGGTGATTGTGAATGCTTGGGCAATTGGAAGAGATCCCAGATATTGGAGTGAAGCTGAGAGATTCAAAGCAGAAAGGTTTCTTGATAGCCCAGTTGATTTCAAAGGTAGAGACTTTGAATTTATCCCGTTTGGTGGCGGAAGGAGGATATGCCCAGGCATCACATTTGCCACAGCTCTCATTGAACTTCCACTCGCCCAATTGCTTTACCATTTTGACTGGAAACTTCCCAATGGAATGGACATTGGTGAATTTGACATGGCTGAGTCATTTGGTTCCACAGTACGAAGAAAAGCCAAGCTCTCCTTAATTCCTACTCGAATCACACTTGAACCACAATCACTTTTCTACATTTTTCTTTTTTTAAATACACTTTTAATCTCTCCTATTGAAAAATTTTCAATTCCGTCCTTCGAAGTTTGA 777 0.4054 MHTSQEHSDLDSPRLTDNNIKAVILDIFGAGTDTSSTTLEWAMSEMLKNPEIMEKAQAEVRKVFDRKGYVNEVDLQQLKFLKLVIKETLRLHPPAALLLPRESSEKCKINGYEIPAKTRVIVNAWAIGRDPRYWSEAERFKAERFLDSPVDFKGRDFEFIPFGGGRRICPGITFATALIELPLAQLLYHFDWKLPNGMDIGEFDMAESFGSTVRRKAKLSLIPTRITLEPQSLFYIFLFLNTLLISPIEKFSIPSFEV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1930 258 FunFam Predicted protein 28 221 - -
Glsi10g1930 258 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 162 171 IPR017972 GO:0005506|GO:0016705
Glsi10g1930 258 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS P450 superfamily signature 160 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS P450 superfamily signature 30 47 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 Pfam Cytochrome P450 8 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 Gene3D Cytochrome P450 1 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 SUPERFAMILY Cytochrome P450 5 224 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS E-class P450 group I signature 159 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS E-class P450 group I signature 19 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS E-class P450 group I signature 82 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS E-class P450 group I signature 169 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS E-class P450 group I signature 123 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PRINTS E-class P450 group I signature 39 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1930 258 PANTHER OS08G0105600 PROTEIN 14 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1930 Glsi-ChrGlsi10 13605412 13608702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1930 5 225 Cytochrome P450 AT3G26300 50.679 8.28e-80 247