Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1928 ATGGAGTTGGAACCCCATATTCTCTCACCTGCTGAAATCTTTTCCTTCTTCCTCTTCTTGTTCATGGTTATTGGCATACTTTGGAGGTCAAAAACCCAGAATTCAAACTCCAAATTCCCTCCAGGGCCACCGAAATTACCTCTTATAGGAAACATGCACCAACTTGGAGCCATGCCCCATCGCTCCCTAGCTCAAATGGCGAACCAACATGGGCCTCTCATGCACATAAAGCTCGGAGGAATTTCCAGCATAGTAATATCTTCTCCTGAAATGGCCAAAGAAATTATGAAAACACACGATTCCATCTTCTCAAATAGGCCTCATCTTCTTGCTGCAGATATAATCACTTACGGCTCCATGGGCATGAGCTTTTCCCCATATGGGAGTTACTGGAGGCAGATGAGAAAGATCTGCACTTTTGAGCTGCTAACTCCAAAGAGGGTCGAATCTTTTAGATCAGTTCGAGAAGAAGAGGTTTGGAATCTTGTGAAAGAGATAGGTTTGAGTGAAGGGTCATCGTTGAATCTCAGTCAGAAGGTATATTCATTGACTTACGGAATAACATCCAAGATAGCTTTTGGTGGGAAATCTGAACATCAAGAAGTTTATATAGAGATTATGAAGGAGGTGATCAAGGTGGTTGGAGGGTTCTCTCTGGCTGATTTGTATCCTTCCGTTGGTGGAGTGCTTCAGGTTTTGACAGGGTTGAGGTTTAAAGTTGAGAAGATTCATGATGAAATGGACAGGATTCTTGAGACTATTGTGAGAGATCATAGGGACAGAGAATCAGAGACAGAAACAGCAGCCATTGGACAAGCAGGGGAAGATCTAGTTGATGTTCTTTTGAGGCATCAGAAGCAGGACAACCTTGAACATCCCCTGTCTGATAACATTATCAAAGCCACCATTTTGGACATCTTCAGTGCTGGAAGTGGAACTTCAGCAAAAACCATGGAGTGGGCGATGTCTGAACTGGTGAAAAACCCAAGGATAATGAAGAAAGCACAAGCTGAGGTAAGAAAAACCTATGGTAAAAAAGGGTATGTAGATGAAGCAAGTGTTCATGAACTGAAGTACTTGAAGTCAGTGATCAAAGAAACCCTGCGTCTTCATCCTCCAGTTCCATTGTTACTTCCAAGGGAATGCAGTGAGAAAGTTATAATTAATGGGTATGAGATAGCTGCCAAGAGCAAAGTCATTGTGAATGCATGGGCAATAGGGAGAGACCCCAAATATTGGGATGAAGCAGAGAAGTTTTGCCCAGAAAGGTTCCTTGATAGCTCAGTAGATTACAAAGGGGCAGATTTTCAGTTCATCCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGAATAGCATTTGGGGTAACTGGTGTTGAACTATTACTGGCTAATTTGATCTTCCATTTTGATTGGAAGATGCCTAATGGGGAAGATCCTCAAGAACTTGACATGACTGAGTCCTTTGGCTTGTCTGTGAGAAGGAAAAATGATTTGCTGTTGGTTCCTGTTAAGTATAGCTCATCTGCAAGTTAA 1533 0.426 MELEPHILSPAEIFSFFLFLFMVIGILWRSKTQNSNSKFPPGPPKLPLIGNMHQLGAMPHRSLAQMANQHGPLMHIKLGGISSIVISSPEMAKEIMKTHDSIFSNRPHLLAADIITYGSMGMSFSPYGSYWRQMRKICTFELLTPKRVESFRSVREEEVWNLVKEIGLSEGSSLNLSQKVYSLTYGITSKIAFGGKSEHQEVYIEIMKEVIKVVGGFSLADLYPSVGGVLQVLTGLRFKVEKIHDEMDRILETIVRDHRDRESETETAAIGQAGEDLVDVLLRHQKQDNLEHPLSDNIIKATILDIFSAGSGTSAKTMEWAMSELVKNPRIMKKAQAEVRKTYGKKGYVDEASVHELKYLKSVIKETLRLHPPVPLLLPRECSEKVIINGYEIAAKSKVIVNAWAIGRDPKYWDEAEKFCPERFLDSSVDYKGADFQFIPFGAGRRMCPGIAFGVTGVELLLANLIFHFDWKMPNGEDPQELDMTESFGLSVRRKNDLLLVPVKYSSSAS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1928 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Glsi10g1928 510 CDD CYP71-like 69 498 - -
Glsi10g1928 510 Pfam Cytochrome P450 40 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 SUPERFAMILY Cytochrome P450 40 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PANTHER CYTOCHROME P450 71B11-RELATED 23 503 - -
Glsi10g1928 510 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 FunFam Cytochrome P450 71D8 32 502 - -
Glsi10g1928 510 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1928 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1928 Glsi-ChrGlsi10 13493533 13495743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1928 17 505 Cytochrome P450 AT3G26300 40.443 3.43e-142 417