Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1915 ATGGCCAGCAATGGTGTAAAGGAGCCCTTGCTGACACAATTATCAGATCCTACAGCTCAAAAAACTAATGGGAAGTTAAGCAGGAGAAGGTATCTCCGATGTAAAAGTGCTCCTCTTGTTGATTTTTCTCCTACCAATAAAAATGGCATTGATTCAATTCCACGTTCTGAGTCCATATTTGGGAAGTTACATCCCAGTTTTAGGAAAGTGGCCTTATACCTTGCCGGGTATTTAGGTGTAGGAGCTGTAATATTCTATCTTGTCAGGAACCAGATCAAAGGGAAGAAAACAGATGGGATTCTTGATGCTATATACTTTACAATTGTAACGATGACCACAGTTGGATATGGAGACCTCGTGCCCGATAGTGACATCACAAAACTACTTGCCTGCACTTTTGTCTTCACAGGAATGGCAGTGGTTGCTTTAATGCTAAGCAAAGCAGCAGACTACTTGGTTGAGAAACAGGAAGTTTTGCTAGTTAAAACTTTCCACAGGCATGAAAAACATGGTCCAGCTCAAATTCTAAAGGAGGTTGAGGTCAATAGAACAAGATACAAATTTTTGGTTGTTTTTGTTCTTCTTTTGGTGCTGATTGTTGCAGGGACAGTTTTCTTAGTGAGGATCGAGAAATTGGATGTTGTCGATGCCTTTTATTGTGTTTGTTCTACAATTACAACTCTGGGTTATGGTGATAAAAGTTTCTCAACTCAAGCAGGAAGAATTTTTGCTGTGTTTTGGATATTGGCAGGTACTATTTGTTTAGCTCAGCTTTTCCTTTACATTGCTGAACTAAACACTGAAAGCAGACAAAAGGCACTTGCTAAGTGGGTTCTTACAAGGAGGATAACAAGTGCAGATTTGGAGGCTGCAGATCTTGATAATGATGGAACTGTTGGGGCTGCTGAATTCGTTATTTATAAGCTCAAGGAGATGGGGAAGATCAGCGAAGAGGATATTTCAATTGTAATGCAAGAGTTTGAGGAGCTTGATGTCGATCAGTCCGGTACTCTCTCCATTTCTGATATAACTCTTGCTCAGGATGCTCATCAATCTTAG 1059 0.4023 MASNGVKEPLLTQLSDPTAQKTNGKLSRRRYLRCKSAPLVDFSPTNKNGIDSIPRSESIFGKLHPSFRKVALYLAGYLGVGAVIFYLVRNQIKGKKTDGILDAIYFTIVTMTTVGYGDLVPDSDITKLLACTFVFTGMAVVALMLSKAADYLVEKQEVLLVKTFHRHEKHGPAQILKEVEVNRTRYKFLVVFVLLLVLIVAGTVFLVRIEKLDVVDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILAGTICLAQLFLYIAELNTESRQKALAKWVLTRRITSADLEAADLDNDGTVGAAEFVIYKLKEMGKISEEDISIVMQEFEELDVDQSGTLSISDITLAQDAHQS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1915 352 Gene3D - 262 350 - -
Glsi10g1915 352 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Glsi10g1915 352 SUPERFAMILY Voltage-gated potassium channels 181 282 - -
Glsi10g1915 352 SUPERFAMILY EF-hand 282 346 IPR011992 -
Glsi10g1915 352 SUPERFAMILY Voltage-gated potassium channels 64 168 - -
Glsi10g1915 352 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Glsi10g1915 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi10g1915 352 FunFam Two-pore potassium channel 1 168 276 - -
Glsi10g1915 352 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi10g1915 352 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi10g1915 352 Pfam Ion channel 74 153 IPR013099 -
Glsi10g1915 352 Pfam Ion channel 194 265 IPR013099 -
Glsi10g1915 352 Gene3D - 64 158 - -
Glsi10g1915 352 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Glsi10g1915 352 Gene3D - 172 261 - -
Glsi10g1915 352 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1915 Glsi-ChrGlsi10 13378277 13379789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1915 50 351 Ion Channels AT5G55630 63.279 3.46e-145 413