Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1906 ATGGGAAGGTGCATGGAGAATATCTCTCAAGGTGAGGAGGAACACATCTTTCGCAGCCGCTATTCAAATGTCCCGGTTCCTGAGAATGTGACACTCCCAGAATTTGTGCTTCAGAATGCTGAATTGTATGCTGAAAAGGTAGCATTTGTGGAGGCTGTGACTGGAAAAGCAATCACTTATAGGGAGGTGGTCAGAGATACACACAGATTTTCAAAGGCCTTGCGTTCTCTTGGGCTGAAAAATGGGAATGTTGTGATTGTGGTGCTCCCAAATGTTGCAGAGTATGCCATTATTGCTTTGGGGATCATGGGAGCTGGTGGGGTGTTTTCAGGGGCAAATCCAACGGCACCTGCATCAGAAATTAAGAAACAAGCAGAGTCTGCTGATGCCAAGTTGATTGTCACAAATGGATTGAACTATGAAAAGGTGAAAAGTCTAGAGCTACCTATCATTGTGCTAGATGATGAACCCGTTGAAGATGCCATGAATTGGAAGAAATTACTTGAAGCAGCAGACCGTGCAGGCGGTAATTTGACAGAGGAACCTGTTCAGCAGAATGATCTCTGTGCCATGCCTTTCTCATCAGGAACCACAGGAATGTCAAAGGGTGTGATGCTGACCCACAGAAACCTGGTAGCTAATCTTTGCTCCACACTCTTTGGGGTAGAGCCGGAAATGGTGGGTCAAGTCACAACACTAGGTCTAATCCCCTTCTTCCATATTTATGGCATTACTGGGATATGCTGTGCGACTCTTAGAAACAAAGGAAAAGTGGTAGTGATGGGAAGGTTTGAGTTAAGGACATTTCTCAATGCTTTGATCACTCATGAGGTCACATTTGCACCCATTGTGCCCCCAATTATTCTCACCTTGGTCAAAAATCCCATAGTGGATGAGTTTGATCTCAGCAAGCTCAAACTCCAAGCCATATTGACTGCAGCAGCACCCCTTGCACCAGAGATACTCAATGCCTTCGAAAATAAGTTCCCTGGCGTTCTTGTCCAAGAAGCATATGGGCTAACTGAACATAGCTGCATCACACTCACCCACGTACAAAAAGGATTCGGGAATTCAAAGAAAAACTCGGTGGGGTTCATCCTCCCAAATTTGGAAGTCAAATTTATTGATCCTGACACTAGCAGATCCCTCCCAAGGAACACTCCTGGTGAACTCTGTGTGAGAAGCCAATGCGTAATGCAAGGTTACTACAAACAGCTGGATGAGACTGCACAGACTATTGATAAGAATGGTTGGCTTCACACTGGTGACATAGGATTCATAGATGATGAAGACAGTGTATTTATTGTTGATCGTATCAAGGAGTTAATTAAATACAAAGGCTTCCAAGTTGCTCCTGCTGAGCTAGAGGCCATTCTTCTTTCTCATTCCTCTGTTGAAGATGCAGCTGTTGTGCCATTACCAGATGAAGAGGCTGGGGAGATACCAGCTGCAAGTGTGGTGATGAGCCCTGGTGCTAAAGAGAGTGAAGAAGACATCATGAACTATGTTGCCTCTAATGTTGCAAGTTACAAGAAAGTAAGAGTGCTTCACTTTGTGGAAGCCATCCCTAAATCTCATTCTGGGAAAATTATGAGGAGGCTTGTTAAGCAGAAAATGGTGGAGAAGATGCGTTCAGAAATCTTCAGCACTGCTTAA 1656 0.445 MGRCMENISQGEEEHIFRSRYSNVPVPENVTLPEFVLQNAELYAEKVAFVEAVTGKAITYREVVRDTHRFSKALRSLGLKNGNVVIVVLPNVAEYAIIALGIMGAGGVFSGANPTAPASEIKKQAESADAKLIVTNGLNYEKVKSLELPIIVLDDEPVEDAMNWKKLLEAADRAGGNLTEEPVQQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVEPEMVGQVTTLGLIPFFHIYGITGICCATLRNKGKVVVMGRFELRTFLNALITHEVTFAPIVPPIILTLVKNPIVDEFDLSKLKLQAILTAAAPLAPEILNAFENKFPGVLVQEAYGLTEHSCITLTHVQKGFGNSKKNSVGFILPNLEVKFIDPDTSRSLPRNTPGELCVRSQCVMQGYYKQLDETAQTIDKNGWLHTGDIGFIDDEDSVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEEAGEIPAASVVMSPGAKESEEDIMNYVASNVASYKKVRVLHFVEAIPKSHSGKIMRRLVKQKMVEKMRSEIFSTA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1906 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 538 - -
Glsi10g1906 551 Pfam AMP-binding enzyme 38 445 IPR000873 -
Glsi10g1906 551 SUPERFAMILY Acetyl-CoA synthetase-like 12 541 - -
Glsi10g1906 551 CDD 4CL 26 533 - -
Glsi10g1906 551 Gene3D - 14 440 IPR042099 -
Glsi10g1906 551 Gene3D - 441 543 IPR045851 -
Glsi10g1906 551 FunFam 4-coumarate--CoA ligase 2 441 542 - -
Glsi10g1906 551 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Glsi10g1906 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 18 440 - -
Glsi10g1906 551 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1906 Glsi-ChrGlsi10 13328423 13331729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1906 5 540 Monolignol Biosynthesis Gene Families AT1G62940 73.792 0.0 802