LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi10g1877	ATGAGAGCGGCCACGAAACGCGAACGAGTTGTCGGCGATAGCAGCCGAACTAACGGCGCCGACCGACTCCGAACTGTGAAAAAGGAACGGGTTAGGGGTGGCCGAGTCGACCCCGCTGATCATGAATCAACTCAGGAGAACGAGCAGGACCCAGCAAGTCGGAGGGTGATTCGGTCTCAGTACTTAGCACTCATGAATTTAATTAATGACAAAAGGGATGATTTGGTAAAAACGGATTCCGACAAGTTCATTACCATCATGAATGAAGTAGATAAGTTACATGAGCAAGTTCAGAAGCCAAGAGAGCAAGTTGCAGATGCTGAGGCACTGCTTGACTTGGCTACCACTTTGGCTGGGTCTGTTAAGTCTCTTCTTAATGAAGGTGTCACCCCTTCAGAATTTGTTAGCTGTTTGTTCAATGAGTTTGGGGAATCCAGTAGGGGTATATGCAGCGAAGAGGGTGCCCAAAACTCAATTAACTGGAAAGAAATTGGACTAGCTGTATCACCGATTTTCATGAATATTCATGGCTGTTGGACCATGCTTGGTCCAATGGAAAATGAGTTGAAACAACGGAAGGTAGCTGCAGGTCACAGAAAGCGTGCAAGGTCAACTGCTAGGGCTAGGCCTGAAGAGCTTGATGATACAATGGCAGAGGAAAAAACAGATACTGATAAGAATATGGCAACAATGTTTGAGATCTTGAGGAAGAAGAAACGTGTCCGACTAGAAAGCCTAATGTTGAACAGAAAATCTTTTGCGGAGACAGTGGAAAACTTGTTTGCTCTATCATTCTTAGTTAAAGATGGTCGTGCTGAAATAACTCTGGATGAAAATGGTTCTCACTATGTTTCACCAAAAAATGCTCCAGCATCCAACTTAGTTATGTCAAAAGAAGTTTCTTTCAGCCATTTTGTGTTCAGATATGATTACCAAGATTGGAAGTTAATGAAGGACATGCTGCCTGATGGAGAGGAGCTAATGCCACATAGGGCTCAGCTTTGCACTGTAGTTGACACTCAGGAAGAGACTGCTGCTTGCAATTCCCAAGCAGCATTGCCAGCAACACCTATCAGGAAGCTGACCCGGAACCGAGGGCTGGTTGTGCAGGAGGAAAGTGTTGTTGAAGAATCTCCTGAATGTGATGAGGAAATTGCTTCTAGAGCTGCTGCAATTCGTAGGTGTAAGCAGTGTGAAGCCAAGAGTTCAGAAATCGAGATGGTTCTGCTAGAGAAACTCTGGGATGATGTTCTTGCCGGCCCACAACCTGAGCGTGGCCTTGGCAAGCTCAGGAAGATCGTCACCTCCCAGCCCTTGAACATCAAAGATGAAGGAGAAGGAAGCAAGTATCAGAGAACGTTGTCGATGCCGGCGACGCCGACAACACCGATTACTCCGACAACACCAACGACGCCGTTGTCGGTGCGTAAAGTTGACAACGTTTGGAGGAGCGTATTCCATCCTGGGAGTAACCTGGCCACCAAGAGCATTGGCGCTGAGATGTTCGACAAACCACTGCCTAACTCTCCCACTGTCTATGACTGGCTCTACAGCGGTGAAACCAGGAGCAAGCATCGCTGA	1581	0.4706	MRAATKRERVVGDSSRTNGADRLRTVKKERVRGGRVDPADHESTQENEQDPASRRVIRSQYLALMNLINDKRDDLVKTDSDKFITIMNEVDKLHEQVQKPREQVADAEALLDLATTLAGSVKSLLNEGVTPSEFVSCLFNEFGESSRGICSEEGAQNSINWKEIGLAVSPIFMNIHGCWTMLGPMENELKQRKVAAGHRKRARSTARARPEELDDTMAEEKTDTDKNMATMFEILRKKKRVRLESLMLNRKSFAETVENLFALSFLVKDGRAEITLDENGSHYVSPKNAPASNLVMSKEVSFSHFVFRYDYQDWKLMKDMLPDGEELMPHRAQLCTVVDTQEETAACNSQAALPATPIRKLTRNRGLVVQEESVVEESPECDEEIASRAAAIRRCKQCEAKSSEIEMVLLEKLWDDVLAGPQPERGLGKLRKIVTSQPLNIKDEGEGSKYQRTLSMPATPTTPITPTTPTTPLSVRKVDNVWRSVFHPGSNLATKSIGAEMFDKPLPNSPTVYDWLYSGETRSKHR	526

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi10g1877	526	PANTHER	UNCHARACTERIZED	15	383	IPR027786	GO:0005634\|GO:0006281\|GO:0030915
	Glsi10g1877	526	MobiDBLite	consensus disorder prediction	1	53	-	-
	Glsi10g1877	526	MobiDBLite	consensus disorder prediction	195	219	-	-
	Glsi10g1877	526	MobiDBLite	consensus disorder prediction	453	472	-	-
	Glsi10g1877	526	Pfam	Dormancy/auxin associated protein	413	526	IPR008406	-
	Glsi10g1877	526	MobiDBLite	consensus disorder prediction	205	219	-	-
	Glsi10g1877	526	Pfam	Nse4 C-terminal	241	326	IPR014854	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi10g1877	Glsi-ChrGlsi10	13124354	13134647	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi10g1877	1	397	Non-SMC Element family	AT1G51130	53.465	2.06e-135	396