Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1875 ATGGATGGTGGCATCATTTTGGCCGGATCCTGCCGTTCAGTCCAACGATCCAAGGGTCCCATCCCAGATCACACTTGCCATCTTATCACTGCCATGTGTCAAACGCCGTCAGTGCACCGTGACCTTGGTTGTGTCCTTTATTTGGAGTCCGAAGCACACCAACAAACATTTGAAATCCAAACGAGGGCCTTTCAACCCACGGGATTCCTGTTTCTGGATGAATTCGGATCCATCCAAGATCTTCCGTTTCTTCCTTCCTCATTAAATCTTCAAGTGCTCAGAGAGAAGTGGTTTTATTTTGTGCATCGGAGGAACTTGGGAAGGAAGATGCCGCAAGAGAGCAACTGCAACGCAATTTTCACACCGCCTTCGAAAAGAGGATTGAAGGCATTGGTGTCTAACGGCAATGAGGCTTCATACACAGTCACTGAGGAGGGTTTCAACGATCATGAATTAGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGGTATCAAGCAGCAGAATGGCTGCGTCTGATGGACAATGGCGCCTCGGCATCACTCTCCAAAGAGCCCTCAGAAGAAGAGTTCTGCCTTGCACTCCGCAATGGCCTCATTCTCTGCAACGTCCTCAACAAAGTCAATCCCGGGGCTGTTCTCAAGGTGGTGGACAATCCGACTCTTGCGGTTCAGTCTGCAGAAGGAGCGGCTCAGTCTGCAATTCAGTATTTTGAGAATATGAGAAATTTTCTGGAGGCCGTAAAGAGTATGAAGCTATTGACTTTTGAAGCTTCGGATTTAGAAAAGGGGGGTTCATCAAGCAAAGTTGTGGACTGCATCCTCTGTTTGAAAGGATATTATGAATGGAAGCTAGGAGGTGGAGTTGGGGTGTGGAGGTATGGAGGAACTGTGAGGATTACTTCCCTTCCAAAGGAGTCTCCTTCCTCCATAATTGGCAGTGAAAGTACTGACGAATCTCTGGATGAGTCTGAGTCATCGCAATATGAACAGCTACTAGAATTTCTCCATCTGTCCAGTGAGGTCTCAATTGAAGAAACCAGAACCATCAATGCTTTGGCTTTCTTATTTGATCACTTTGGACTCAGACTCCTTCAAGCTTACCTCAGGGAGACTGATGGGATTGATGATCTGCCTATGAATACAATGGTAATTGATACTTTGCTAAGCAAGGTGGTCAAGGATTTCTCAGCATTGCTTGTTTCTCAAGGCACTCAGCTTGGACTTTTCTTGAAGAAAATATTGAAAGGTGATATTGGTTGCCTATCAAAGACAGAGTTTATAGAAGCTATCTCACTATATCTTAATCAAAGAAGTAGTTTGGCATCCAAAGATTTCTCCAAATTCTGCATTTGTGGTGGAAAGCTTGACAGCGCTCGGAAGGATATCAATTATTCTTTCAATCATGCTGAAATAATTAATAATCAACAGAAACAATTGGAGGGGATGAAATACGTTTTTGAAGAGACAAAAATGGAGGTCAAAGAAATTCAATCAGGGTGGGTGCAAGAATTGAGTAGGCTTGAGCATCATATCAAGAGTCTTGAAGTGGCCTCCTCTTCTTACCACAAGGTTTTAGAAGAGAACCGCCAACTTTACAATCAAATACAAGACCTGAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCCTTCTTACCTGGGCAATCAAATGGACAGTCAACAGTAGACTACATCGGAGAAAATGGAAATATTATGATTGTCAATCCCCTTAAGCAGGGGAAAGATGCAAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAATGAATGTCACACAAGAACAAATATATGCTGACACACAACCATTGATCAGGTCTGTTCTAGATGGCTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGGAAGACCTACACAATGAGTGGCCCTGATCTGACAACTAAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTGTTCCATATATCAAAGGAAAGGGCGAATGCCATAAAATATGAAGTTGGAGTCCAGATGATTGAAATATACAATGAACAACATTTATTTGTTAATTGTTCCAGTTCCTTGACAAGATATACATTAGATATACGAAACAATTCTCAATTGAATGGCCTTAACGTGCCTGATGCAAGTTTAGTTCCGGTTAATTGTACCCAAGATGTTCTTGATTTAATGAGGATTGGTCAGAAGAACCGTGCAGTGGGTGCTACAGCTCTAAATGAACGAAGCAGCCGTTCTCACAGTATTTTGACAGTTCATGTCCGAGGAAGAGAGCTAGTTTCTAACTCCATTCTTAGAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAAAGGGTGGACAAATCTGAGGCTGTTGGAGAAAGACTAAAGGAGGCCCAATATATAAATAGATCACTTTCTGCACTTGGAGATGTTATATCTGCTTTGGCACAAAAGAGTCCACATATTCCATACAGAAACAGCAAGCTCACACAAGTTTTACAAGATTCTTTAGGTGGGCATGCCAAAACGTTGATGTTTGTTCATATAAATCCTGAACATAACGCTCTTGGAGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTAGCATCCATTGAACTTGGTGCTGCTCAATCAAATAAGGAAACTGGTGAAGTCAGAGAGCTCAAAGAAGAGATATCAAACCTCAAGTTGGCATTGGAGAGGAAGGAAAATGAATTGGAACAATGGAGAGCTGGTAATGCTAGAAACAATGTAGAATCTCAAAAACAAAGGGCTGTTTCACCTTTTCGCCTACCCAAATATGGTGCCAGTCCCAGCATGAGGCCTGAAACTTTCCAACGACCCATTGATGATAGAAAAACTGAGGCTAGAAGTTGTTCTTCAGGAAAGCAAAGAAGGTCAAGATTTCCCTCATCATTTACGGACAAGGAATCCATTCCAAAAATGACTCTTCTGGCTGAAGAAAAGATAGCAAGCTCAGGGAAGGCAAGATCACCATCTCCTCCTGTCAGGAGATCACTATCCACTGATAGAGGGTCTGTCATTAAAAGCAAGGTCAAAATTGACACAGCAGATAACCAACCAATATTAAAACATCCATTTCCAGCTAGAGTACCAGTAAACAAATCTCTTGCCGCAATGCCTATGGCCCCATGCATTGATAATAACTCAAGGATGTATGTGAATCTGAATGAGCCAGTGGAGCAGGATAACATTTCTGAAACACTCTTCAACCTCCAAAAGGTCACTTCCAGGAAAGTTCATCAAGAACATGAAGAGGAACAATTTAAGCAATCATTTGGTGTGGTAAGACAAGGTGGTATAAGAAAAAGCAAGGCTGACAGCAAGGCCAAGGCCAAGCATCATCAACAACTGCCCTCTAGGATTCAAAAGTCTGAGTATCAACCTACATTGATTCCTGACATGGACATTGCTGGTGAAAAGACTTTAGAGGCACCTCGAAAGAGTGATTACTCTGAGCCAGAAAATGATCTTGGCCTATTCGAGTTTTCAGTCCATGGCGCTGTAAACCTAAAAAAGATGCGTCAGAACTTCTCAAGGAATTCTCAGAACCTTGAACCAAGAATAACAGTGCAAGCAGGGGAGCCCTTATTGGCTAGCAAAGTTGAAAACAAACTTCTAAATGGTTCAGGCCGAAATCTCAAGGAAGGCAGCGATACATCCATGCCTGAATTCAGAAGAAGCAGATCAACCCCGCGTGGAAAATTTCTTTTATCTTGA 3741 0.4272 MDGGIILAGSCRSVQRSKGPIPDHTCHLITAMCQTPSVHRDLGCVLYLESEAHQQTFEIQTRAFQPTGFLFLDEFGSIQDLPFLPSSLNLQVLREKWFYFVHRRNLGRKMPQESNCNAIFTPPSKRGLKALVSNGNEASYTVTEEGFNDHELAQRKAEEAASRRYQAAEWLRLMDNGASASLSKEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVDNPTLAVQSAEGAAQSAIQYFENMRNFLEAVKSMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLGGGVGVWRYGGTVRITSLPKESPSSIIGSESTDESLDESESSQYEQLLEFLHLSSEVSIEETRTINALAFLFDHFGLRLLQAYLRETDGIDDLPMNTMVIDTLLSKVVKDFSALLVSQGTQLGLFLKKILKGDIGCLSKTEFIEAISLYLNQRSSLASKDFSKFCICGGKLDSARKDINYSFNHAEIINNQQKQLEGMKYVFEETKMEVKEIQSGWVQELSRLEHHIKSLEVASSSYHKVLEENRQLYNQIQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGNIMIVNPLKQGKDARRVFSFNKVFAMNVTQEQIYADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTKETWGVNYRALRDLFHISKERANAIKYEVGVQMIEIYNEQHLFVNCSSSLTRYTLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMRIGQKNRAVGATALNERSSRSHSILTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQYINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNALGETISTLKFAERVASIELGAAQSNKETGEVRELKEEISNLKLALERKENELEQWRAGNARNNVESQKQRAVSPFRLPKYGASPSMRPETFQRPIDDRKTEARSCSSGKQRRSRFPSSFTDKESIPKMTLLAEEKIASSGKARSPSPPVRRSLSTDRGSVIKSKVKIDTADNQPILKHPFPARVPVNKSLAAMPMAPCIDNNSRMYVNLNEPVEQDNISETLFNLQKVTSRKVHQEHEEEQFKQSFGVVRQGGIRKSKADSKAKAKHHQQLPSRIQKSEYQPTLIPDMDIAGEKTLEAPRKSDYSEPENDLGLFEFSVHGAVNLKKMRQNFSRNSQNLEPRITVQAGEPLLASKVENKLLNGSGRNLKEGSDTSMPEFRRSRSTPRGKFLLS 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1875 1246 Gene3D - 153 282 IPR036872 -
Glsi10g1875 1246 PANTHER KINESIN-LIKE PROTEIN KLP-3 168 1110 IPR027640 GO:0003777|GO:0007018
Glsi10g1875 1246 FunFam kinesin-like protein KIN-14F 537 912 - -
Glsi10g1875 1246 SMART ch_5 163 280 IPR001715 GO:0005515
Glsi10g1875 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 909 IPR027417 -
Glsi10g1875 1246 SUPERFAMILY Calponin-homology domain, CH-domain 155 310 IPR036872 -
Glsi10g1875 1246 Gene3D Kinesin motor domain 484 873 IPR036961 -
Glsi10g1875 1246 ProSiteProfiles Calponin homology (CH) domain profile. 161 282 IPR001715 GO:0005515
Glsi10g1875 1246 MobiDBLite consensus disorder prediction 963 978 - -
Glsi10g1875 1246 PRINTS Kinesin heavy chain signature 617 638 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 PRINTS Kinesin heavy chain signature 821 842 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 PRINTS Kinesin heavy chain signature 741 758 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 PRINTS Kinesin heavy chain signature 772 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 MobiDBLite consensus disorder prediction 1105 1127 - -
Glsi10g1875 1246 Coils Coil 522 542 - -
Glsi10g1875 1246 MobiDBLite consensus disorder prediction 912 1014 - -
Glsi10g1875 1246 Coils Coil 878 919 - -
Glsi10g1875 1246 MobiDBLite consensus disorder prediction 1215 1246 - -
Glsi10g1875 1246 Pfam Calponin homology (CH) domain 164 282 IPR001715 GO:0005515
Glsi10g1875 1246 Pfam Kinesin motor domain 548 871 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 SMART kinesin_4 540 879 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 CDD CH_AtKIN14-like 163 278 - -
Glsi10g1875 1246 MobiDBLite consensus disorder prediction 945 962 - -
Glsi10g1875 1246 ProSiteProfiles Kinesin motor domain profile. 542 871 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi10g1875 1246 FunFam kinesin-like protein KIN-14F 153 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1875 Glsi-ChrGlsi10 13103128 13112367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1875 447 871 Calmodulin-binding Proteins AT5G65930 38.161 5.14e-76 274