Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1835 ATGAGTTCTCTGGCCTCGAAATTTGATTCCAAAGTGTTGATATCAATTGCTTTGCTTTGTTTTGTTGGACTGCTGCTTCGTCTGTACAATTCTCTAATTGGGAACCCACAGAGGCTTAGGTCTAAGCTAAAGAAGCAAGGTATCAATGGTCCACCACCAACTTTGCTGCTGGGAAATATCAGAGAGGTAAAGAAGGCTCGCTCTTCCACTGCAAAGCCTCCTCATCCTTCTTCATCTGAAACCCCTCTTTCTCATGAGTGCGCTTCCATCCTCTTTCCCGACTTAAAGAATTGGAGGGAGCAATATGGTCAAGTATTTACGTTTTCTCTTGGAAACAAGCAAATTTTGTCTGTCGACCAACCCGACGTAGTAAGAGACATCACCATTTGCACATCCTTAAAATTGGGGAAGCCTTCGTATCAGCACAAACTGCTGGGCCCTTTGCTTGGTCGAGGCATTTTAACTTCAAACGGTGCTACCTGGGTCCATCAAAGAAAGCTTCTTGCTCCTGAACTTTACATGGACAAGGTTAAGGGAATGCTGAATATGATTAGTGAGTGTGCCATTTCTGTGCTAAACTCTTGGAGCAGTAGAGTAGATGCAGAACATGGAAGTGCAGATATAGACATTGATGGATACCTTCCCACGAAGATCAACAGAGAAGTATGGGCACTGGAAAAGGAGGTGAAGGATTTGATAATGCAAGCGGTGAAGGAGAGAAAGGGAAGTGCAGTTAAGATTGAGAAGGACCTGCTTCAGATGGTTCTAGAAGGTGCAGAGAAGAGCGACCTGGGTGAAGAGGGCATTGACCGTTTCATTTTGGATAACTGCAAGAATATATACTTGGCTGGGTATGAGACCACGGCAGTTGCTGCTAGCTGGTGCCTCATGTTGCTGGCCTCAAATCAACAATGGCAAGATCGTGTTCGTTCTGAGGTACTAGAAATTTGTCGGGGCAGAGTTCCAAATTCTGATATGCTTCGTAAGATGGCGCAGTTAACAATGGTGATTCATGAATCGTTGCGCCTCTATCCCCCGGTGGCTATAATGTCAAGGGAAGCCTTCGAGGACATGAAATTTGGGGACATTGATGTTCCCAAGGGTGTCAACCTTTGGACAATGGTACTAACTTCACACACAGATCCAACTATCTGGGGACCTGATGCCTACGAGTTCAACCCAGAAAGAGCCATCGCTTCCTTGTTGACTATGAAATATTGCGCAATGTTGTTTCCATGTACATGTCCAAAAATAAGCAGTGAAGGAACAGCAATTCATCTCTTAGTGCTCCTTGCATCTGTTGGCTACTTCATAGGACAGAGGCAGAAAGTAGAGACCTCAAATACAGCAAATTCTTCGGAGAGACTTCAAGAGAGGAAGATGCTACGAAGGATAAACATTGCCATTGATTTTACGAAGCACCGATACACTGTCCTTGCACGTAAACACCGAATTTGTACCCCACTGGAATTTGTGGATGTTGCTGATTCTGATTTTCTCATCGACAGTGAACCTGTTAATGATGATGATGAATCTGACTCTGAATATGAGATTGAGAAATACTTTGTGCTTGCCGCTTCCAAGAGCCGATTGTTTGGCCGGAAAAAGCCTCTTCATGTTGTTCTTGGTGCCGGAATAATTGCTGATATCATACTCTGGCGAGACAAGAACGTTTCAGCAAGTATTCTCGCTGGCATAAGTATCATATGGTTTCTCTTTGAGGGGTTGGGTTACAATCTGCTTACTTTCATTTGTCACTCTCTTCTACTCCTATTGACAACGCTGTTCCTATGGACAAGTTTAGCCCCCTCAACCAACTTGCCTAATCCACCTGAATTATCAGATCTTACCTTACCCGAAGGGCTGCTTGCTAATGCTGCTCTTTCAATGAGATATGACCTTACCCAAGGATTCAGAACCTTTCGGGTCATATCTACCGGACAAGATTTGAAGACATTTATTTTGGTTACGGTGACATTATGGAGTGTCTCTGTTGTTGGCAGTTGGTTCAGTTTTGTAACTCTCTTCTACATAGTGTCTGTGATATTGCTGATAGTGCCGATGCTATATGAAAAGCATGAGGATCTAGTTGACATCATTGCTGAGAAGGCATTGGCTGAATTGAGAAGGCATTGGCTGAAAAAGTTTTGA 2151 0.4384 MSSLASKFDSKVLISIALLCFVGLLLRLYNSLIGNPQRLRSKLKKQGINGPPPTLLLGNIREVKKARSSTAKPPHPSSSETPLSHECASILFPDLKNWREQYGQVFTFSLGNKQILSVDQPDVVRDITICTSLKLGKPSYQHKLLGPLLGRGILTSNGATWVHQRKLLAPELYMDKVKGMLNMISECAISVLNSWSSRVDAEHGSADIDIDGYLPTKINREVWALEKEVKDLIMQAVKERKGSAVKIEKDLLQMVLEGAEKSDLGEEGIDRFILDNCKNIYLAGYETTAVAASWCLMLLASNQQWQDRVRSEVLEICRGRVPNSDMLRKMAQLTMVIHESLRLYPPVAIMSREAFEDMKFGDIDVPKGVNLWTMVLTSHTDPTIWGPDAYEFNPERAIASLLTMKYCAMLFPCTCPKISSEGTAIHLLVLLASVGYFIGQRQKVETSNTANSSERLQERKMLRRINIAIDFTKHRYTVLARKHRICTPLEFVDVADSDFLIDSEPVNDDDESDSEYEIEKYFVLAASKSRLFGRKKPLHVVLGAGIIADIILWRDKNVSASILAGISIIWFLFEGLGYNLLTFICHSLLLLLTTLFLWTSLAPSTNLPNPPELSDLTLPEGLLANAALSMRYDLTQGFRTFRVISTGQDLKTFILVTVTLWSVSVVGSWFSFVTLFYIVSVILLIVPMLYEKHEDLVDIIAEKALAELRRHWLKKF 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1835 716 Gene3D Cytochrome P450 213 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 Pfam Cytochrome P450 95 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 Pfam Cytochrome P450 213 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 214 - -
Glsi10g1835 716 ProSiteProfiles Reticulon domain profile. 547 716 IPR003388 -
Glsi10g1835 716 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 Gene3D Cytochrome P450 37 212 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 SUPERFAMILY Cytochrome P450 85 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1835 716 Pfam Reticulon 548 704 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1835 Glsi-ChrGlsi10 12699102 12709790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1835 10 346 Cytochrome P450 AT5G24910 34.509 9.90e-75 245