Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1803 ATGAACCGGAAGGAGGTCTTCTCTCTCGGTCCACCATTTTCGTCCCCACCGGAAATAGTAAAACCTCAATCCTCTTATCAGGTCTTCTCCAAACACCTTCCTACTTGTACTTTATATAATACACTCCGCAAACAGACTTTCCTTGATCTCTTTAATTCCTCAATTCATCCTCTCTGTGTTCTGATCTTTCTCTCACAGAGACCTGCAAGTCAAGAAAACATGCTCCTAATCTTCATATTCTGGTCATGGTGGATCTTCCATGGATCACTTGCAGACCCACAAATTCGTCTATTGAACAGTGGGTGCAGCCAGTACAACGCGACCAACTTGTCCAGCTTCAACGATAATCTGAACGCAACGTTCGCAGAGCTCAGAGGTCAGGTGAGCAACCAAAGCAAGCACTTTGCCACGGCACAGCAAACGAGAGGAGCAAGCCCTGTTTATGGTCTTTTTCAATGCAGAAACTATCTCTCCGTCGCTGATTGTGTCGCTTGCTTCTCCGCTGCCACCGCCCAAATCCGTAACTGCTCTGCCGGCGCCAATGGGGCCCGCGTTATCTACGATGGCTGTTTCCTCAGGTACGAGAGCAGTGGCTTCTTCGACCAGACCACTCAGCCTGGCAACAGCGTGATATGTGGGAATCAGACTGCAGAGGCAGCCACTGCATTTAGTGCAGCTGCACTACAAGTGCTGATGAATCTCCAAATAGCAACACCCAGAATCGCTGGTTTCTTTGCAGCTACCAAGACTCAAGTGACTAATGGTCCAAACATTTACGCCATTGCTCAGTGTGCTGAAACTGTCACACAGAGTGGGTGTCTGGACTGCTTGACTGTTGGATACAACAATATAGATAATTGTCTTCCCAATTCAAATGGTAGAGCGTTTGATGCTGGGTGTTTTATGAGATACTCCGAGACATCCTTCTTTCCTGATAACCAGATCACTGATATTACACCCTTCTTGACACGAGGAGGTTCAAGTAAGAAAGGGGCCATTATTGGTGGGGTTGTTGGCGGTGTAGCTCTTGTTTTGATCCTCCTTGCGTTATTTGCCTGGCTTAGACGATCAAAAAGGCCCAAGAGGATTCCTAGAGGTGACATTTTGGGAGCAACCGACTTGAAAGGCCCAGTGAACTACAGGTATAAAGATTTGAAAACTGCAACAAAAAATTTCAGTGAAGAAAATAAGCTAGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTTTGAAAAATGGGAAAGTAGTTGCAGTCAAGAAATTAGCTTTAGGCCAGTCCAGCAGGATGGATGAAAATTTTGAAAGTGAAGTCAAGCTTATAAGCAATGTTCATCATCGGAATCTTGTTCGGCTTCTGGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGAAAAACAGCAGCCTTGACAGATTCTTATTTGGTGAAAATAGAGGCTCTCTCGCCTGGAAGCAAAGGTATGATATAATTTTAGGCACAGCAAGGGGTTTGGCCTATTTGCACGAGGAATTCCACGTTTGTATCATACATAGAGATATAAAGACTAGCAATATCCTCTTGGATGATGATCTTCAGCCCAGAATTGCTGATTTTGGGTTGGCAAGGCTTCTACCTGGGGATCAATCTCATCTCAGCACGAAAGTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATTCATGGTCAGCTATCGGAGAAGGCTGATACCTACAGCTATGGAGTTGTAGTCCTTGAAATCATAAGTGGTCAAAAGAGCAGTGAATTGAAGGTTGATGCTGATGGCGAATACCTCCTTCAACGAGCTTGGAAACTGTATGAGAAAGGCATGCACTTAGAGTTGGTGGACAATACATTAAATCCCAACGATTATGATGCAGAAGAAGTGAAGAAAATCATAGAAGTTGGCTTGCTGTGCACTCAAGCATCCGCTGCAATAAGGCCAACAATGTCTGAAGTAGTTGTTCTACTCAAAAGCAAGGGATTACTGGGGAGCATGCGACCCACTATGCCTGTCTTTGTTGAATCTCAGTTGAGGTCACGTGAAGACACCTCTACCTCTACTGCTTCCTCCACGTCCAATGCTACTGCTTCCGCTTCTATGCTATCAGCAAGGTGA 2136 0.4513 MNRKEVFSLGPPFSSPPEIVKPQSSYQVFSKHLPTCTLYNTLRKQTFLDLFNSSIHPLCVLIFLSQRPASQENMLLIFIFWSWWIFHGSLADPQIRLLNSGCSQYNATNLSSFNDNLNATFAELRGQVSNQSKHFATAQQTRGASPVYGLFQCRNYLSVADCVACFSAATAQIRNCSAGANGARVIYDGCFLRYESSGFFDQTTQPGNSVICGNQTAEAATAFSAAALQVLMNLQIATPRIAGFFAATKTQVTNGPNIYAIAQCAETVTQSGCLDCLTVGYNNIDNCLPNSNGRAFDAGCFMRYSETSFFPDNQITDITPFLTRGGSSKKGAIIGGVVGGVALVLILLALFAWLRRSKRPKRIPRGDILGATDLKGPVNYRYKDLKTATKNFSEENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSSRMDENFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMKNSSLDRFLFGENRGSLAWKQRYDIILGTARGLAYLHEEFHVCIIHRDIKTSNILLDDDLQPRIADFGLARLLPGDQSHLSTKVAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGQKSSELKVDADGEYLLQRAWKLYEKGMHLELVDNTLNPNDYDAEEVKKIIEVGLLCTQASAAIRPTMSEVVVLLKSKGLLGSMRPTMPVFVESQLRSREDTSTSTASSTSNATASASMLSAR 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1803 711 Pfam Salt stress response/antifungal 102 196 IPR002902 -
Glsi10g1803 711 Pfam Salt stress response/antifungal 212 306 IPR002902 -
Glsi10g1803 711 ProSitePatterns Protein kinases ATP-binding region signature. 398 421 IPR017441 GO:0005524
Glsi10g1803 711 ProSiteProfiles Protein kinase domain profile. 392 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1803 711 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 149 700 - -
Glsi10g1803 711 CDD STKc_IRAK 398 664 - -
Glsi10g1803 711 SUPERFAMILY Protein kinase-like (PK-like) 376 663 IPR011009 -
Glsi10g1803 711 MobiDBLite consensus disorder prediction 682 711 - -
Glsi10g1803 711 FunFam Cysteine-rich receptor-like protein kinase 2 356 468 - -
Glsi10g1803 711 Gene3D Phosphorylase Kinase; domain 1 368 468 - -
Glsi10g1803 711 SMART serkin_6 392 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1803 711 Pfam Protein kinase domain 393 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1803 711 Gene3D Transferase(Phosphotransferase) domain 1 469 668 - -
Glsi10g1803 711 FunFam Cysteine-rich receptor-like protein kinase 2 94 199 - -
Glsi10g1803 711 FunFam Cysteine-rich receptor-like protein kinase 2 207 309 - -
Glsi10g1803 711 ProSiteProfiles Gnk2-homologous domain profile. 205 309 IPR002902 -
Glsi10g1803 711 FunFam Cysteine-rich receptor-like protein kinase 2 469 670 - -
Glsi10g1803 711 ProSiteProfiles Gnk2-homologous domain profile. 95 199 IPR002902 -
Glsi10g1803 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Glsi10g1803 711 MobiDBLite consensus disorder prediction 684 711 - -
Glsi10g1803 711 Gene3D - 208 309 IPR038408 -
Glsi10g1803 711 Gene3D - 94 199 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1803 Glsi-ChrGlsi10 12498486 12505588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1803 75 711 Receptor kinase-like Gene Family AT1G70520 37.768 1.92e-135 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi10g1803 Pkinase 1.2e-49 CL0016