Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1772 ATGAGGAGAAAACACTTCAAGTTTCCCGCCAAAGCCAAGTCCGCTGTTTTCATAGTAGCCGCCTCCATTGCCTACCGATCCACCATCTCCGATTCTTCTCCCGCCCCATCGACAAAGTTTTCCGACAAAATCAGCACAGAAATCCATGGCATCGTCCGCGCCTCCCGCGCCATCTTTAACGTTGCTTTCACTGTTGCCGACTACAAATATTCTTTGCGTGGACTTCAGAAGGACTCCGACGAGTATCGTCACGTAATCTCCGAGGTTCATCTACGCTCAGCCAAGAGAATTTTGAAGTTATGCGAAGCCAATAAAGGATTTTATGTGAAGGCCGGACAGTTTGTTGCTTCCCAGCGTGTGGTTCCAAAAGAATACTCATCAACTTTGTCCACATTAGAGGATCAGGTTGCTCCTTGTCCTTTTAAAGCTATAAAACAAGTATTAATCAACAATCTGGGACCAGATTTCTCTGATATGTTTTTGTCAATTAATGAACAACCAATAGCTGCTGCATCTATTGCTCAAGTTCACCATGCAGTGTTAAAAAGTGGTCATCAAGTAGCAATTAAGGTGCAATATCCTGGGATAGAGCAGCAGATGAATTTTGACACAAGAACATTGTTTTTCCTATCCAAAACTATTGCAAGGTTGTTTCCTGATTACAGGTTTGAATGGCTGGCATCAGCGTTTACAAAGGCCATATCTTTTGAAATTGATTTTATTCAGGAGGCAAGGAATTCTGAGAGAGCAGCCAAAAACTTCAGAAACAATAAAATGGTCAGGGTTCCTCATGTATTCTGGGAGTTGACTACAAGACAAGTCTTGACCATGCAGTTTTTTATGGGACGCAAGATTGATGACTTGGACTTTCTGAAGCAGATTGGGGTTGATCCAGTAGAGGTAGCAAAACAATTGGTCAAACTTTTTGCTGAAATGATATTTGTGCATGGTTACATACATGGTGATCCACACCCTGGTAATATATTAGTTTCTCCTGAAGCTTCTGATGGCTTTTCTCTGGTTCTTCTAGATAATGGATTGTACTGGGAATTGGATGAAGAATTTAGAAAGGACTTTTGTCAGCTATGGGAGGCTTTGCTTCTACAAGACTCAAAGAAAATAATATGTCTTGCTGAGCGATTTGGAGTAGGGAAGTATTCTAGATACCTACCCATCATTTTCACTGGAAGAAATGTTGAAAGTAAATCTGGCCTTTGCAGCAGAATGTCAATTGTGGAGAAAGAAAATATGAAAAGGGATTTGAATTCTCTTGTATTGGAGGACTTTTCTTCATTCATGGAGTCTGTGCCACCAGATTTTCTCGCTATACTGCGTGTAGACGGGTTGTTAAGGTCTATCATTAGAAAGTTAGGCGTCTCACGATGGATCAGGTTTCTAGCTTATGCCAAATATGGGACGTATGGTCTCTCTCCAAAGTTGGATGCTGAATCGGATTTTGCTGTGAAAGCGGTGTTTTTCAGATTCACATCAGAGTTAAAATTTCTTCATATCCTTACAAAGTTAATTCTCGGGAATATTGAGGCTATGGTTTTACCTTGGCTGCAGAAGGTGAAAAATGCACTGCATTCCTTTTACAGCAAGATCAATAGTGACATTTGGGGCCTCCTGATCCATTCTGTTTTTCTTCTTTTTCTAATCCAGCATTTCTCTTTTTCTCTCTCTCTCTCTGTCCACCGTCAACCTCCGTTTCACTGTCTCTCTGCCATGGTTCTCTCTAAAACCTCCTCTCAGACGGACGTCTCCGTCCACTCAACCTTTGCTTCCCGCTATGTCCGCGCTTCGCTTCCCAGGTTCAGGATGCCGGAGGAGTCGATACCGAAGGAGGCGGCGTATCAGATAATAAACGACGAGCTGATGCTGGATGGGAACCCCAGGCTCAACCTCGCCTCCTTCGTCACCACCTGGATGGAGCCTGAATGCGACAAGCTCATCATGTCCTCCATCAACAAGAACTACGTTGACATGGATGAGTACCCTGTCACTACTGAACTCCAGAATCGGTGCGTGAACATGATAGCTCATCTTTTCAATGCACCGCTTGGAGACTCAGAGACTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCTATAATGTTGGCTGGTTTGGCTTTCAAAAGGAACTGGCAAAACAAAAGGAAAGCAGAGGGGAAGCCTCATGACAAGCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAAGTGGAGCTGAAAGAGGTGAAACTGAGGGAAGGATATTACGTAATGGACCCTGAAAAAGCAGTGGAAATGGTGGATGAGAACACCATCTGTGTTGCTGCTATCCTTGGCTCCACACTAAATGGAGAGTTCGAAGATGTCAAGCGCTTAAACGATCTCTTAATCGAAAAGAATAATAGAACTGGATGGGATACTCCGATTCATGTGGATGCAGCGAGTGGTGGGTTCATTGCACCATTTATTTATCCAGAGCTTGAGTGGGACTTCCGTCTGCCACTAGTGAAGAGCATCAACGTTAGTGGGCACAAGTATGGTCTAGTCTATGCCGGAATTGGGTGGGTCATTTGGAGAAACAAGGAGGACTTGCCTGAGGAACTCATCTTCCACATCAACTATCTTGGAACCGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCAAGTCAAGTTATTGCTCAGTACTACCAACTCATTCGCTTGGGTTATGAGGGATACAGGAATGTGATGGAAAATTGCCGAGACAACATGATAGTACTCAAAGAAGGACTCGAGAAAACAGGAAAGTTCAACATTGTCTCCAAAGACGACGGGGTACCCCTGGTGGCCTTCAGTTTGAAGGAAAATGGGCCCTTCAACGAGTTCCAAGTCTCCGACTTGCTGAGGCGATTTGGGTGGATAGTGCCAGCATACACCATGCCCCCTGATGCCCAGCACGTCACTGTACTACGTGTTGTGATCAGAGAGGACTTCTCCAGAACCCTCGCGGAGCGTCTCGTGCTGGATATCCAGAAAGTCTTGCACGAGCTGGAATTGCTGCCTGCGAGGGTAGTGAATACCACCACAATAACAGTTTCTGGAGAACAGGTATTGGAAAAGAATAATAATGGGACTAATGGAATTGTGGTTGCCAAGAAGAGTGCTTTGGAGACCCAGAGGGATATCACCACTGCTTGGAAGAAGTTCGTGCTGCAGAGGAAGAACATGAATGAGAAGATGAATGGTGTTTGCTAG 3261 0.4471 MRRKHFKFPAKAKSAVFIVAASIAYRSTISDSSPAPSTKFSDKISTEIHGIVRASRAIFNVAFTVADYKYSLRGLQKDSDEYRHVISEVHLRSAKRILKLCEANKGFYVKAGQFVASQRVVPKEYSSTLSTLEDQVAPCPFKAIKQVLINNLGPDFSDMFLSINEQPIAAASIAQVHHAVLKSGHQVAIKVQYPGIEQQMNFDTRTLFFLSKTIARLFPDYRFEWLASAFTKAISFEIDFIQEARNSERAAKNFRNNKMVRVPHVFWELTTRQVLTMQFFMGRKIDDLDFLKQIGVDPVEVAKQLVKLFAEMIFVHGYIHGDPHPGNILVSPEASDGFSLVLLDNGLYWELDEEFRKDFCQLWEALLLQDSKKIICLAERFGVGKYSRYLPIIFTGRNVESKSGLCSRMSIVEKENMKRDLNSLVLEDFSSFMESVPPDFLAILRVDGLLRSIIRKLGVSRWIRFLAYAKYGTYGLSPKLDAESDFAVKAVFFRFTSELKFLHILTKLILGNIEAMVLPWLQKVKNALHSFYSKINSDIWGLLIHSVFLLFLIQHFSFSLSLSVHRQPPFHCLSAMVLSKTSSQTDVSVHSTFASRYVRASLPRFRMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRNWQNKRKAEGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNRTGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEKTGKFNIVSKDDGVPLVAFSLKENGPFNEFQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDIQKVLHELELLPARVVNTTTITVSGEQVLEKNNNGTNGIVVAKKSALETQRDITTAWKKFVLQRKNMNEKMNGVC 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1772 1086 FunFam Glutamate decarboxylase 576 640 - -
Glsi10g1772 1086 SUPERFAMILY Protein kinase-like (PK-like) 134 369 IPR011009 -
Glsi10g1772 1086 Gene3D - 641 935 IPR015421 GO:0003824
Glsi10g1772 1086 Gene3D - 576 640 - -
Glsi10g1772 1086 SUPERFAMILY PLP-dependent transferases 590 1019 IPR015424 -
Glsi10g1772 1086 FunFam Glutamate decarboxylase 641 935 - -
Glsi10g1772 1086 CDD ADCK1-like 131 382 IPR045307 -
Glsi10g1772 1086 Pfam ABC1 atypical kinase-like domain 132 375 IPR004147 -
Glsi10g1772 1086 FunFam Glutamate decarboxylase 936 1023 - -
Glsi10g1772 1086 PANTHER GLUTAMATE DECARBOXYLASE 576 1076 IPR010107 GO:0004351|GO:0006536|GO:0030170
Glsi10g1772 1086 Gene3D - 936 1023 - -
Glsi10g1772 1086 Pfam Pyridoxal-dependent decarboxylase conserved domain 608 956 IPR002129 GO:0016830|GO:0019752|GO:0030170
Glsi10g1772 1086 NCBIfam glutamate decarboxylase 591 1020 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1772 Glsi-ChrGlsi10 12200610 12222068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1772 576 1086 Calmodulin-binding Proteins AT5G17330 83.366 0.0 895