Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1761 ATGCCCTTGGAAGGGATTTTCATTGAACCCACTTCTACTACTCCTGATCTTTCCCTTCACATAAGCCCTCCAGCCACCTCTTCCTCTTCTTCTTTGATTTGCAACAACAGCACCTCCCAAGCAGGCACCAACTATGAGCCCCACAATTCAAGCACCAATTTCTCTTCTAAATCTGTGTCTCAAGCTCACACTGAGCTCTCTCTTGGCAGGAATTTCCCTTGTGGAGAACCACTCCATAATAGTAATAACCCTTATTTTCAGAACCACCATAATTTCCATCACCATCTCCAGCACAACTCTAACATAAACTATGGAGTGTCATTACTCGATGTATCATCATCATCAGACGGGTTGAGGCCTATCAAAGGGATTCCCGTGTATCACAACCGTTCCTTCCCTTTCTTGCCCGTAGACCATACCAGAGGAGACAAGATGTGCTTATATCACCATATCCCTAATTCTTACCCCTCTTTGTCCTCTTCTTGTTCCTCTCTCTGCTCTCCTTCTACTTCGCCGTACTTGGCGGCAGTGGGGGGTTTGGATCCCGTGTCGATCTTAAACTCGACGGGAGCTAACGGGTCCTCGGCGGTGTACAGGGCGGGAAGTAGCACAAGGTTTAATGGGATTTCTTCAGAAGCTTTCAAATCTCATCAATTGCACCATCAGTATGGGGTTGGCCCTTCTGATCAGGCTCCTTCTGGGTTAATGAGATCGAGGTTCTTGCCTAAACTTCCCACCAAGAGGAGCATGAGAGCTCCTAGAATGCGGTGGACAAGCACCCTCCATGCTCGATTTGTTCATGCTGTTGAACTTCTTGGCGGCCATGAAAGAGCGACTCCAAAGTCAGTACTTGAGCTGATGGATGTGAAGGATCTAACATTAGCTCATGTGAAAAGCCATCTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGGCATTCAGATGGGTCTGGAGACGATGACATGTCTCCGATGGGTAGCAGCGGTGACCGGAGACAGTTTTCAGATCAAAGGGGCAGAACAGATAGGTCAGTGCAGCAAGATATGGACTATTCTTCCACCACAACTCTATGGAGTAATTCTTCAAGTAGTAGAGAGCCATGGCCACAAACTAGTTCCAAAGATATAGATGGTCTCAGACCACCTACCTTCCAGTCACTGCCAATTTCAGGAAGCCATCAAATTCAGGAGTGTGGTTCAACCCAACTCAAGAACAACTTGTCAGGCTCTAATTTGGAGTGCAAGAATCCAAGCTTGGAGTTTACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGTCTAA 1323 0.4701 MPLEGIFIEPTSTTPDLSLHISPPATSSSSSLICNNSTSQAGTNYEPHNSSTNFSSKSVSQAHTELSLGRNFPCGEPLHNSNNPYFQNHHNFHHHLQHNSNINYGVSLLDVSSSSDGLRPIKGIPVYHNRSFPFLPVDHTRGDKMCLYHHIPNSYPSLSSSCSSLCSPSTSPYLAAVGGLDPVSILNSTGANGSSAVYRAGSSTRFNGISSEAFKSHQLHHQYGVGPSDQAPSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGDDDMSPMGSSGDRRQFSDQRGRTDRSVQQDMDYSSTTTLWSNSSSSREPWPQTSSKDIDGLRPPTFQSLPISGSHQIQECGSTQLKNNLSGSNLECKNPSLEFTLGRPDWNGKGQV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1761 440 MobiDBLite consensus disorder prediction 307 390 - -
Glsi10g1761 440 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 306 IPR006447 GO:0003677
Glsi10g1761 440 SUPERFAMILY Homeodomain-like 250 306 IPR009057 -
Glsi10g1761 440 MobiDBLite consensus disorder prediction 352 390 - -
Glsi10g1761 440 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 15 437 IPR044847 GO:0000976|GO:0006355|GO:0010158
Glsi10g1761 440 FunFam Myb family transcription factor 251 309 - -
Glsi10g1761 440 Gene3D - 252 309 - -
Glsi10g1761 440 MobiDBLite consensus disorder prediction 11 60 - -
Glsi10g1761 440 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1761 Glsi-ChrGlsi10 12133790 12138903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1761 1 437 G2-like Transcription Factor Family AT5G16560 44.325 3.90e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi10g1761 None None None