Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1748 ATGGATGCTCAAGCCAAGAAAAAGGCATTGTTTCGCGCTAAATTGAACGCCCAGAAGAAGGAAAAGCGCATAGAATCCCCTCTTGTTAGGTATAATGAATTTGATCAGCCCGTGTGTCGGGTTTGTGATGTTGTCCTGAAGTCTGAATCTAATTGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTTAAAGCTAATGCAGCTGGATTAACCCAGCATAACCATGCTAAGCCTGTTACCAATATCAATTTGCTTAAGCGTAAATCTGAATATTCTTCAGATTCACATTCTAAGATGCCTGATCGATCACAAGAATCACCTAAACCTCTGCCATCATCTGTGCTTCCACCAGATTTTTTCGATAACAATGATGCTAAAAAGCCAAGATTGGAAAAAGACTCTTTTGAGTTGGTGGACCCTGATTCAGATAAAAGAATAGGGACTTCTGCTCCAAGTCAGGTGTTAAACTTGGAGGAGGAGAAAGGTGGTTTGCATAACAATAATGCAGCACAGCCAAAGGGAAGTCAAGCAACAACTGAGATTAGGCAGACATCAGCCAAGACTGCTGATACAGAGATCAAGCAAGTGAAAGGGGTTCTTCCTGAAGGCTTTTTTGATAACAAGGAGGCTGATTTGCGGGCACGTGGCATAAAGCCTGTTAAGCTAGATGTCAAAGATGAGTACAAGGAATTTGAAAAGTTGATTCAAGAGGACTTGCGGGAGGTGGATGACCGGTTTGAAGAAGAAGAGATTGATGCTGCTGAAATGATTGAAGAAGCTGAATCTGTAGAGCAAAAGAACTACAGGGAGAAAGTGGAAATGTTGAGGAAGAAGAGATTGGAGATGAAGGCTGCTAAGCCTGCAAAGGATAACGGATCTTCTGAGGTTGTAATCAAGGAGTCTAGACATGAAGAGTCCCCCAGTGATGATGACAGTGATGACAATTTTGCAGTGGACTGGAGAGCACAACACTTGTGA 993 0.426 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESNWDAHQVSRKHREAISNLKANAAGLTQHNHAKPVTNINLLKRKSEYSSDSHSKMPDRSQESPKPLPSSVLPPDFFDNNDAKKPRLEKDSFELVDPDSDKRIGTSAPSQVLNLEEEKGGLHNNNAAQPKGSQATTEIRQTSAKTADTEIKQVKGVLPEGFFDNKEADLRARGIKPVKLDVKDEYKEFEKLIQEDLREVDDRFEEEEIDAAEMIEEAESVEQKNYREKVEMLRKKRLEMKAAKPAKDNGSSEVVIKESRHEESPSDDDSDDNFAVDWRAQHL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1748 330 Coils Coil 244 290 - -
Glsi10g1748 330 Gene3D Classic Zinc Finger 32 70 - -
Glsi10g1748 330 Pfam Zinc-finger of C2H2 type 39 61 - -
Glsi10g1748 330 MobiDBLite consensus disorder prediction 72 158 - -
Glsi10g1748 330 MobiDBLite consensus disorder prediction 286 330 - -
Glsi10g1748 330 MobiDBLite consensus disorder prediction 94 108 - -
Glsi10g1748 330 MobiDBLite consensus disorder prediction 127 148 - -
Glsi10g1748 330 PANTHER UNCHARACTERIZED 1 330 IPR040050 GO:0003676|GO:0005681|GO:0008270
Glsi10g1748 330 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1748 1 330 C2H2 Transcription Factor Family AT3G02860 50.733 9.86e-89 266