Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1738 ATGTCTCTGCGGCTGAGAGTAGCAAATTTACTCAAAAAAGTTCGTTTTCCTGCTCGCAATGCCTATTCTAGTTCTGTAACAACCTCCAATGCGTTGCCCATCTCACTTTCTGGCAAAATTAATACTTCCCATTCCTATCGAAGCGGAGCATCTGATTGGAGGATAGATCCTAGGGATCCTCGTCTGTGGATTGTTATATACGGACATATTGCATTAATTCTTGGCATTAATGCCAACCCAGTGTATGCAAAAGATGCATCAACTGAAGCAGTTTCTGATGATGACACTGAAAAGGCTGATGGGATTGGATTACACAAAATTGAGGATGGCTCTGTAGCATCAAATATACATACATCAAAATGGAGAGTCTTTACAGATAAAGGGAGAGACTTATTTCTTCAGGCAAGCATACAAGAAGCCAAAGAAGGTTTTGGCCACAGAGATCCACATGTTGCATCTGCATGCAATAATCTGGCTGAGTTATACAGAGTCAAGAAGGCATTTGACAAAGCAGAACCACTGTATTTGGAAGCTATCAACATATTGGAGGAATCATTTGGTCCTGAAGATATACGAGTGGGGGCTGCTGCTCACAACCTCGGGCAGTTTTACCTTGGACAGCGAAAATTGGAAAAGGCTCGGGTTTACTACGCGGCCGCTTTGAAGATAAAGAAGCGTGTTTTGGGATATAACCATCCAGACTGTGCTGATACAATGTATCATCTAGGAGTGGTGCTGTATCTTCAAGGAAAAGAAAGTGATGCTGAGGCCTTTATTCAGGACTCTATAAGGATGCTAGAGGAAGGTGGTGAAGGGGAATCCTTTAAATGCATGAGAAGACTTCGATACCTCTCTCAGATATATATGAAATCTCATCGTCTTGCTGAAGCTGAGATGGTTCAAAGAAAGATCCTGCATATAACGGAACTATCAAAGGGATGGAATTCCTTGGACACTGTTATTGCAGCTGAAGGTTTGGCTCTTACTCTGCAAGCATCTAGTAATTTAAAAGATTCACAAGAGCTTCTTGAAAGATGTCTCAATGCCCGGAGAGCCTTACTACCTCGTGACCATATTCAGTTGCTTTCTGGGAATTGCACTCTCAAACTGCATAAATCAGATGCTTCTAGAGCTAAAGCCGAGTTTGATAAGGCAAAGGATCATTTGAATAACTCCATAAGGATAGCACGTCAAGTTTTAGATAAATCATTGAAACAAAAAGTCAACTTAAAGAACGACAGTGCACCTGGACATTCTAAAAAGGAAAGACAAGCAGCATTGGTCATACTGTTGCGATCACTCAGCACTTTGGCGTCGATGGAGTTAGCTAATCAAGAATTGCATGAAACTCAGGAAGGACATATAAATTATGAGGCTCGGGAGGCACTCCTCCAATGTGTTTCTGCTTACAGGGAGTATGGATCTGAGAAGTCAATTGCTGATGCCCCTGAAGTAAAGAGCGAGTATCTTTCATGTTTAAAGCTTTCTCAAAGCTTGCTCGGTGATAAACTTGCTGAATAG 1521 0.4175 MSLRLRVANLLKKVRFPARNAYSSSVTTSNALPISLSGKINTSHSYRSGASDWRIDPRDPRLWIVIYGHIALILGINANPVYAKDASTEAVSDDDTEKADGIGLHKIEDGSVASNIHTSKWRVFTDKGRDLFLQASIQEAKEGFGHRDPHVASACNNLAELYRVKKAFDKAEPLYLEAINILEESFGPEDIRVGAAAHNLGQFYLGQRKLEKARVYYAAALKIKKRVLGYNHPDCADTMYHLGVVLYLQGKESDAEAFIQDSIRMLEEGGEGESFKCMRRLRYLSQIYMKSHRLAEAEMVQRKILHITELSKGWNSLDTVIAAEGLALTLQASSNLKDSQELLERCLNARRALLPRDHIQLLSGNCTLKLHKSDASRAKAEFDKAKDHLNNSIRIARQVLDKSLKQKVNLKNDSAPGHSKKERQAALVILLRSLSTLASMELANQELHETQEGHINYEAREALLQCVSAYREYGSEKSIADAPEVKSEYLSCLKLSQSLLGDKLAE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1738 506 Gene3D Tetratricopeptide repeat domain 130 274 IPR011990 GO:0005515
Glsi10g1738 506 Gene3D Tetratricopeptide repeat domain 275 457 IPR011990 GO:0005515
Glsi10g1738 506 Pfam Tetratricopeptide repeat 195 268 - -
Glsi10g1738 506 SMART tpr_5 366 399 IPR019734 GO:0005515
Glsi10g1738 506 SMART tpr_5 236 269 IPR019734 GO:0005515
Glsi10g1738 506 SMART tpr_5 194 227 IPR019734 GO:0005515
Glsi10g1738 506 SMART tpr_5 152 185 IPR019734 GO:0005515
Glsi10g1738 506 SUPERFAMILY TPR-like 231 349 IPR011990 GO:0005515
Glsi10g1738 506 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 502 - -
Glsi10g1738 506 Pfam Tetratricopeptide repeat 326 359 - -
Glsi10g1738 506 Pfam Tetratricopeptide repeat 151 189 - -
Glsi10g1738 506 SUPERFAMILY TPR-like 147 265 IPR011990 GO:0005515