Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1727 ATGTCGGTTTCGTGCGGGGTGGAGTGCGTGTTAATACTTGGTTGCGCTCGCTGGATGTGGAGGCGCTGCACCTATATTGGCTCCTACGATAGCGCTACTTGGACTTCCGCCACCACCGATGAGTTTGAACCCGTCCCTCGCGTGTGCCGATTAATCCTCGCCGTCTACGAGACCGATCTCCACAACCCAAGTTACAAACCGGCCGGTGGCTACCGTCTCAACCCCGACTGGGTCTTCAAGCGCGTCACATACGAGCAGACGCTTGGCCAAGCGCCGCCGTATATAATTTACACTGATCACGACCACCGAGAGATTGTGCTCGCTGTTCGTGGGCTCAATCTCATCAGAGAGAGCGATTACAAGCTCCTTTTGGACAATCGCTTGGGTATGCAAAAATTCGATGGTGGCTATGTCCATCACGGTCTGTTGAAGTCTGCCATTTGGTTGCTCAATGAAGAATCCGAGACCCTGAAGCGCTTGTGGATTGAAAATGGCTCCGATTATAGAATGGTCTTTGCTGGGCATTCTTTGGGTTCCGGTGTGGTTTCCTTATTGACGATAATTGTTGTGAATCATACGGACCGATTGGGAGGGATACCTAGGAACAAGATTCAGTGTTACGCGATAGCGCCTGCGAGGTGTATGTCCCTGAATTTGGCGGTCAAATATGCGGATGTCATACATTCTATAGTGTTGCAGGATGATTTCTTACCGAGAACGCCCACTCCATTGGAAGACATATTCAAGTCAATCTTCTGCTTGCCCTGCTTATTATTCTTGGTTTGCTTGAGGGACACCTTCATACCGGAAGGTAGAAAGCTTAGAGATCCAAGAAGACTTTATGCACCTGGACGAATGTACCATATTGTAGAGAGAAAATTTTGCAGATGTGGGAGGTTTCCTCCAGAAGTGAGGACTGCTATTCCTGTTGATGGGAGATTTGAGCATATTGTCTTGTCCTGTAATACAACATCAGACCATGGAATTATTTGGATTGAAAGGGAAGCAGAGAAGGCTTTACAAATAATGAAGGATAGCAGCTCCGAGACTGTGACAATTCCTCCAACCGTACAAAGGATTGAGAGGTTGCAGACCATTGAAAAAGAACATAAAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTCCCTCATGCAGTGGACACTGCAGAGGATGATCCGAGTGAGCACAGGGAAGAAGAGCCTTCCAAGGATAAGAGCGAAGGTGCCATTAGTACCAAATCCAAATCAAGTAGTGGAAGGTTAAACTGGGATGAAGTTGTTGAACAACTCTTCAAGAAGGGTGAATCAGGGGATCTACGTCTCAAAAGGGATACAAGTGTCCCAAAATAA 1350 0.4719 MSVSCGVECVLILGCARWMWRRCTYIGSYDSATWTSATTDEFEPVPRVCRLILAVYETDLHNPSYKPAGGYRLNPDWVFKRVTYEQTLGQAPPYIIYTDHDHREIVLAVRGLNLIRESDYKLLLDNRLGMQKFDGGYVHHGLLKSAIWLLNEESETLKRLWIENGSDYRMVFAGHSLGSGVVSLLTIIVVNHTDRLGGIPRNKIQCYAIAPARCMSLNLAVKYADVIHSIVLQDDFLPRTPTPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNTTSDHGIIWIEREAEKALQIMKDSSSETVTIPPTVQRIERLQTIEKEHKDALERAVSLNVPHAVDTAEDDPSEHREEEPSKDKSEGAISTKSKSSSGRLNWDEVVEQLFKKGESGDLRLKRDTSVPK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1727 449 Pfam Lipase 3 N-terminal region 7 70 IPR005592 GO:0016042
Glsi10g1727 449 CDD Lipase_3 41 242 - -
Glsi10g1727 449 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
Glsi10g1727 449 MobiDBLite consensus disorder prediction 388 410 - -
Glsi10g1727 449 Pfam Lipase (class 3) 106 242 IPR002921 GO:0006629
Glsi10g1727 449 Gene3D alpha/beta hydrolase 32 255 IPR029058 -
Glsi10g1727 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 444 - -
Glsi10g1727 449 MobiDBLite consensus disorder prediction 378 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1727 Glsi-ChrGlsi10 11848563 11852314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1727 1 342 Miscellaneous Gene Families AT5G37710 75.510 0.0 562