Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1713 ATGAAGAGGTATCGCCAAGATACCTGTATTAGTGCTGGTTCTGGTTCCAGATATGGAGAAGGAAATGCGAATGACAGTGGTGGTATTGCTGCTGGTTTAAAAGCTGAATGCTCATCAATGTCGTGTGGGAAGGCGAAGATGTGGGAGGAAGAACCCGATGCCGGTGGGATGGATGAGTTGCTGGCAGCTTTGGGCTACAAGGTGCGGTCGTCGGACATGGCGGATGTAGCGCAGAAGCTAGAGCAGCTGGAGATGGTTATGGGCATTGCTCAGGAAGATGGAATATCCCATCTAGCTTGTGACACCGTCCACTATGACCCAACCGATCTGCATGGGTGGGTTCAGAGCATGCTCACGGAGCTCAACAATTCACCCAATTGTTTCGATCCATCGGCGCTATTGGCAAACCAGCAAAATGATGACCCCATTATAGCTTCCACCGTTAATTTCTCCAATTCTCGGCAACAGATTGAGAATCGATCGCATGTTTACGACGATCATTCGGAGTACGACCTCAGAGCGATTCCTGGCATGGCCGCATACCCACAAAGCGAACAGGCCCCAGAAAGAGAAAATAGCCATAAGCGATCGAAAATTTCACCAACCGAAACAGATTCCTTCCCAGTTTTACCATCAGCTTCGTCGCCATCGCCGGCGACTGTATCAGAGCACACACGACCAGTGGTTCTCGTTGACTCCCAAGAAAATGGTGTTCGTCTCGTGCACACGCTCATGGCATGTGCAGAGGCTGTTCAACAAAACAATTTGAAGCTGGCGGACGCGCTCGTGAAGCACGTAGGCTTGCTTGCGATGTCTCAAGCTGGAGCAATGAGGAAGGTGGCCTCCTACTTCGCCCAAGCTTTAGCTCGTCGAATTTACGGAGTCTACCCACAAGAATCCCTCGATTCCTCCTTCTCCGATATGCTCCGTATGCATTTCTACGAGTCCTGTCCCTACCTAAAATTCGCCCATTTCACCGCTAACCAAGCTATTCTCGAAGCATTTGCCACCGCAAACAGAGTTCACGTCATCGATTTCGGGCTGAAGCAGGGGATGCAATGGCCGGCATTGATGCAGGCTCTCGCATTACGACCCGGCGGTCCACCAACGTTCCGACTCACCGGAATCGGCCCGCCACAGCCGGACAACACCGACGCTCTGCAACAAGTGGGTTGGAAATTGGCGCAATTGGCTAAAACAATAGGGGTCCAATTCGAATTCCGCGGGTTCGTCTGCAACAGTTTGGCGGATCTTGAACCTCCCCTGCTCGACATCCGACCCGGAGAGGCCGTCGCCGTGAACTCGGTTTTCGAACTCCACCCGATGTTGGCCCAACCCGGCGCCATCGAAAAGGTGTTGAACACGATCAAGGCGATGAAGCCGAAGATCGTGACTGTGGTGGAGGAAGAAGCGAATCACAACGGGTTGGTTTTCTTGGACCGGTTCACGGAGGCACTGCACTACTACTCGAATCTGTTTGACTCGCTGGAGGGATCGTCATCCGGGTTAACGGCGCTGAGTCAGGACGTGGTGATGTCGGAGCTATATCTGGGGAGACAAATATGCAACGTGGTGGCGTGCGAAGGGTTGGAACGAGTAGAGAGGCACGAGACTCTGAGTCAGTGGAGGGGGAGGATGGAATCGGCCGGGTTCGACTCAGTTCATTTGGGTTCGAATGCGTTTAAGCAAGCAAGCATGCTATTGGCAGTGTTCGCCGGCGGAGATGGGTATAGAGTGGAAGAGAAAAATGGATGCCTCATGCTTGGGTGGCACACCCGACCCCTCATAGCTACCTCGGCGTGGAAAATTCCGGCAAGTGAACTGTAA 1827 0.5287 MKRYRQDTCISAGSGSRYGEGNANDSGGIAAGLKAECSSMSCGKAKMWEEEPDAGGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGIAQEDGISHLACDTVHYDPTDLHGWVQSMLTELNNSPNCFDPSALLANQQNDDPIIASTVNFSNSRQQIENRSHVYDDHSEYDLRAIPGMAAYPQSEQAPERENSHKRSKISPTETDSFPVLPSASSPSPATVSEHTRPVVLVDSQENGVRLVHTLMACAEAVQQNNLKLADALVKHVGLLAMSQAGAMRKVASYFAQALARRIYGVYPQESLDSSFSDMLRMHFYESCPYLKFAHFTANQAILEAFATANRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAKTIGVQFEFRGFVCNSLADLEPPLLDIRPGEAVAVNSVFELHPMLAQPGAIEKVLNTIKAMKPKIVTVVEEEANHNGLVFLDRFTEALHYYSNLFDSLEGSSSGLTALSQDVVMSELYLGRQICNVVACEGLERVERHETLSQWRGRMESAGFDSVHLGSNAFKQASMLLAVFAGGDGYRVEEKNGCLMLGWHTRPLIATSAWKIPASEL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1713 608 MobiDBLite consensus disorder prediction 202 222 - -
Glsi10g1713 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 598 IPR005202 -
Glsi10g1713 608 SMART DELLA_2 58 131 - -
Glsi10g1713 608 ProSiteProfiles GRAS family profile. 231 602 IPR005202 -
Glsi10g1713 608 Pfam GRAS domain family 240 602 IPR005202 -
Glsi10g1713 608 Gene3D - 56 121 IPR038088 -
Glsi10g1713 608 MobiDBLite consensus disorder prediction 181 222 - -
Glsi10g1713 608 FunFam DELLA protein GAI 56 121 - -
Glsi10g1713 608 Pfam Transcriptional regulator DELLA protein N terminal 58 125 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1713 Glsi-ChrGlsi10 11601891 11603717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1713 44 603 GRAS Transcription Factor Family AT2G01570 61.235 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi10g1713 GRAS 6.9e-138 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1713 10 11601891 11603717 Glsi10g1713 10 11601891 11603717 CCT
Glsi10g1713 10 11601891 11603717 Glsi10g1713 10 11601891 11603717 ECH
Glsi10g1713 10 11601891 11603717 Glsi04g0180 04 1212542 1214836 ECH