Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1709 ATGGAGAACTTGATGGGTCTGCTCAGAATTCGTGTCCACAGAGGGGTGAATCTTGCTATCAGAGACGTCGTAAGCAGCGACCCTTATGTTGTCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGAGTTGTAAAGAAGAATATCAATCCTGAGTGGAATGATGATTTGACTTTATCTATTTCAGATCCTCGTCTTCCAGTTCAGCTTTATGTGTATGACAAAGACATATTTAGTATGGATGACAAGATGGGGGACGCAGAGTTCGACATTAATCCACTTCTTGAAGCTGTAAGGATGCACTTGGCCAGCATCCCAGATGGAACAATAGTGACAAGATTACAACCTAACCGGCAAAACTGCCTAGCCGAAGAGAGCCAAATTGTGTGGAAAGACGGCAAGGTCGTCCAAAACATGTTTCTTCGACTAAGGAATGTGGAGTCTGGGGAAGTGGAGCTCCAATTGCATTGGATTGACATTCCTGGTTCCAGGGGAAAAACAATCTTTGCAAAGCCTACATTTATAGGCCCATCCATTAGTTTTGGTGTACGGCCCAATTCTCCTAAGGTTTCTACTTCATCTGCCTTCTTTAGCCTAGATCATTATTAGGTTGATTTTGCTACGCCTTTGGATTATAAAGAGCCTGATAAAGAGAAATTATCAGATGTCGAGATCAAAGCGTCTGATGTTAAGATTTCTGATCTGAAGATTCAAGAGGACAAGTCTGTGCCTTTTGTGGGAAATGCGAAGCGTTTGGATGGAAAGCCTTCAAAGGCGCCATTGGTTAAGGGTTCAGGTTCAGAGACACAGAGACATGGTTCAAGTAGGAAGGTTTCGTCAGGAACGTCGCTTGTATTTGGTTCCAAATCCAATGCTGGGAAGCCATTAAAGGAAGATGGGAAGATTCAAGAAGAGCGGACATATACGATAGAAGATAATAACAAAACGAATTGCTTACTCAGTTGGATCAGAAGTTTGTAA 978 0.4274 MENLMGLLRIRVHRGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNINPEWNDDLTLSISDPRLPVQLYVYDKDIFSMDDKMGDAEFDINPLLEAVRMHLASIPDGTIVTRLQPNRQNCLAEESQIVWKDGKVVQNMFLRLRNVESGEVELQLHWIDIPGSRGKTIFAKPTFIGPSISFGVRPNSPKVSTSSAFFSLDHYXVDFATPLDYKEPDKEKLSDVEIKASDVKISDLKIQEDKSVPFVGNAKRLDGKPSKAPLVKGSGSETQRHGSSRKVSSGTSLVFGSKSNAGKPLKEDGKIQEERTYTIEDNNKTNCLLSWIRSL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1709 325 Gene3D C2 domain 4 162 IPR035892 -
Glsi10g1709 325 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 162 IPR044562 -
Glsi10g1709 325 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Glsi10g1709 325 CDD C2_ArfGAP 6 148 - -
Glsi10g1709 325 MobiDBLite consensus disorder prediction 262 288 - -
Glsi10g1709 325 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Glsi10g1709 325 SMART C2_3c 7 102 IPR000008 -
Glsi10g1709 325 MobiDBLite consensus disorder prediction 247 299 - -
Glsi10g1709 325 Pfam C2 domain 6 94 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1709 Glsi-ChrGlsi10 11576965 11581273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1709 38 164 C2H2 Transcription Factor Family AT1G70790 58.140 1.75e-48 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1709 10 11576965 11581273 Glsi10g1709 10 11576965 11581273 ECH