Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1686 ATGAAGAGATACATTCCCCAGAGAGAGATGGCAATTGGGTTCATGGAGGTGCTGTTGGTCAAAGCAAAGGGCCTTCAAAACACTGATATCTTTGCTCGTATGGATCCATATGTTCTGATACAATACAAAGGCCAAGAGCGCAAGAGTAGTGTACTCCATGAGGGGGGAAACAACCCAGTATGGAACGAGAAATTTTTGTTCAGAGTAGAATACCCCGGATCAGGCGACCAGTACAAACTCATCCTTAAAATCATGGACAAAGACATATTTTCTGCAGATGACTTTGTCGGCCAAGCCATAATTTATGTGGAGGATTTGTTGGCCATAGGAGCAGAGAATGGAGCAGCTGAGCTTCGTCCTCGGAAATATAGTGTGATTCGTGCAGATGAATCTTACTGTGGAGAAATTGAAGTTGGCATAACTTTCACCCGAAAGGAAGAAGAGGAAACTGTTGAGGAAGAGATAGGAGGATGGAAGGAAAGCTACAACTACAAGTTGTGCTCTTCTGTGAAAGAAGAAATAAAAAAACACAGGCTTCAAGAGGCAGTCACAGATGCGGAATCTGATATAGAAGATCACCTTTCAAAAACATACTTAATCGAAGTTGAAGAAGCTGGTCTCGCAATATCTGCAGCATCCCGGTTACTGACAAGACTACTTGATTGCGAGCAGTTTCACAACAAAATAAACTCCTCCAGTTTCATCGGCTTGCTTCGAGAAATCCTCAAGTCTGGAATCCCTCTCCACAGCAAAGACTGGGTAGCTGCTTGCCTAGTTAAACTGAGCTCCCTCTCTGGTCACAACCCAAGTTTCAACCCTATCAATGAGGAAGTCATGCTTTACGAGACAATCCCGAGACTTGTAGAACAGATCAAAACTTCATTCTCTTCAGAATCACAGGAAGCTGCTGTACTGATAGAAGCAGGCAGTGAAAAGGCAGTTGAAGCAGGCTTGGCAATTCTGTATAATCTGAGCATGGACAGTGAAAATCTATCCGCAATTGTGGCTGCTGGAGCAGTCCCAGTATTGAGAAGAATTGTTTTATCACAAAGGCCTCAATGGGTTAAGGCACTTCATTTGTTGAAGAGTTTGCCAACTTGA 1101 0.4351 MKRYIPQREMAIGFMEVLLVKAKGLQNTDIFARMDPYVLIQYKGQERKSSVLHEGGNNPVWNEKFLFRVEYPGSGDQYKLILKIMDKDIFSADDFVGQAIIYVEDLLAIGAENGAAELRPRKYSVIRADESYCGEIEVGITFTRKEEEETVEEEIGGWKESYNYKLCSSVKEEIKKHRLQEAVTDAESDIEDHLSKTYLIEVEEAGLAISAASRLLTRLLDCEQFHNKINSSSFIGLLREILKSGIPLHSKDWVAACLVKLSSLSGHNPSFNPINEEVMLYETIPRLVEQIKTSFSSESQEAAVLIEAGSEKAVEAGLAILYNLSMDSENLSAIVAAGAVPVLRRIVLSQRPQWVKALHLLKSLPT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1686 366 Pfam C2 domain 16 110 IPR000008 -
Glsi10g1686 366 SUPERFAMILY ARM repeat 210 354 IPR016024 -
Glsi10g1686 366 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 146 IPR035892 -
Glsi10g1686 366 Coils Coil 176 196 - -
Glsi10g1686 366 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 305 366 - -
Glsi10g1686 366 SMART C2_3c 14 115 IPR000008 -
Glsi10g1686 366 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
Glsi10g1686 366 Gene3D C2 domain 9 175 IPR035892 -
Glsi10g1686 366 Gene3D - 182 364 IPR011989 -
Glsi10g1686 366 CDD C2_putative_Elicitor-responsive_gene 13 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1686 Glsi-ChrGlsi10 11396339 11402529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1686 6 118 C2H2 Transcription Factor Family AT4G21160 33.043 3.85e-10 58.9