Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1679 ATGCAATACGTGGCGCTTCTTCATTGGAATCTCGCCTTTTTGTTCAAACTGTCAGAGTCAGCAACACGCACGCACACATGGGTTGCTATATGTTTGCAAACCATGGGTGATGCAATTGATTTGACTGGTGATGGAGGCGTCATAAAGACCATTGTGAGAAAAAGCAAAACTGATGCTGTGGCTCCAACAGAAGATCTTCCTCTTGTTGATGTTCATTATGAAGGCAAGCTTGCTGATACTGGCGAAGTATTTGACACTACACATGAAGATAACACTGTGTTCTCTTTCGAGCTTGGAAAGGGCAGTGTTATCAAGGCTTGGGACGTTGCAGTGAAGACCATGAAGGTTGGAGAAATTGCAAAAATAACTTGCAAGCCAGACTATGCATATGGCAGTGCAGGATCTCCACCAGATATCCCCCCAGATGCGACACTTGTTTTTGAAGTTGAGCTAGTTGCCTGTAATCCTCGGAAGGGCTCCAGTCTGGGAAGTGTTTCAGAAGAGAGGGCTAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATTGCTGCTGCCGCCAAAGAGGAGGAGAAAAGGAAGAGAGATGAAGCAAAGGCAGCAGCAGCTGCTCGCGTGCAAGCCAAGTTAGAAGCCAAGAAAGGTCAAGGAAAGGGTAAAGCTAAAGGAAAGTAG 669 0.4649 MQYVALLHWNLAFLFKLSESATRTHTWVAICLQTMGDAIDLTGDGGVIKTIVRKSKTDAVAPTEDLPLVDVHYEGKLADTGEVFDTTHEDNTVFSFELGKGSVIKAWDVAVKTMKVGEIAKITCKPDYAYGSAGSPPDIPPDATLVFEVELVACNPRKGSSLGSVSEERARLEELKKQREIAAAAKEEEKRKRDEAKAAAAARVQAKLEAKKGQGKGKAKGK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1679 222 MobiDBLite consensus disorder prediction 183 200 - -
Glsi10g1679 222 Gene3D - 30 154 IPR046357 GO:0003755
Glsi10g1679 222 Coils Coil 165 199 - -
Glsi10g1679 222 MobiDBLite consensus disorder prediction 183 222 - -
Glsi10g1679 222 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 215 - -
Glsi10g1679 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 68 152 IPR001179 GO:0003755
Glsi10g1679 222 SUPERFAMILY FKBP-like 41 152 - -
Glsi10g1679 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 66 155 IPR001179 GO:0003755
Glsi10g1679 222 FunFam Peptidylprolyl isomerase 35 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1679 Glsi-ChrGlsi10 11305340 11311666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1679 39 160 Calmodulin-binding Proteins AT5G48570 37.008 1.14e-12 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1679 10 11305340 11311666 Glsi10g1679 10 11305340 11311666 ECH