Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1669 ATGGCTGGGATTTGCTGTGGTGTTGTTGGGGAAGGAGAGACGCCGACCCCAATGGAGCCGAGCCGACCATCTCGGCGCCGGAGGTTGGACGTACTGCCCTATAAGTATATAGCTGACATGCCAGTGCCACCACCCGAGGGCGGCCTGAAGCGCCAAAAGCTGGATCCTTGTGCTGCTGCGCCACCACAAGCGCGAGACTGCGGAAACGCAGTTGAGAATTGTGAATCTTGCGATGATAAGAACAAGAAGGAACAAAATAAGGAGCCCAAGGGAGATAAAGTTCAGTCAACAGTTTCTTTGTTTAATTCAACCGCTACGGAGGTTGGTAATGAGGATGTCAAGGATTGTCCAAAGTTTGGGGTAACATCTGTTTGTGGTAGAAGAAGGGACATGGAAGACGCTGTTTCAGTTCGTCCATCCATCTGCCAAGAACCGGGTCAAATTCAGAAAGAGTTCCATTTCTTCGGTGTGTTCGACGGCCATGGTTGCTCTCATGTGGCGACGATATGTAAGGAAAGGCTACATGAGATTGTGAAGGAAGAGGTTGGGGGAGCTGGAGAGGATTTGGAATGGAAGTCTTTGATGGAACAGAGCTTCGCTCGGATGGACGAGGAGGTGCAAAACTGGAGCCAAACGAACCAGAGGCCTACTTGCAGGTGCGAGCTTCAGACTCCTCACTGTGACGCCGTTGGATCTACGGCTGTTGTTGCCATCGTTACTCCCGACAAGATAATCGTCTCAAACTGTGGCGATTCGCGCGCGGTTCTCTGCCGAAACGGCGTCGCAGTTCCGCTTTCCTCCGATCACAAGCCTGACCGACCCGACGAGTTGCTCCGAGTCCAAGCTGCCGGAGGGCGCGTGATTTATTGGGACGGTCCACGAGTGCTCGGAGTGCTGGCAATGTCCAGAGCAATAGGCGATAACTATCTGAAACCGTACGTGATATCGGAGCCGGAGGTGACGGTAACAGAACGGACGGACGAAGATGAGTGTTTGATATTGGGGAGTGATGGTCTGTGGGATGTAGTATCAAACGACACGGCATGTGGGGTGGTGCGGATGTGCCTGAAGGTGCAGAAGCCACCATCACCGCCGGGGTCGCCGGGGAGCGACATGGCGGTGTGCTCCGCAGTGGATGGGTCAGACAAGGCGTGCTCGGACGCGTCCATTCTGCTAACGAAGTTGGCTTTGGCGAGGCATAGTAGTGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAGAGAAACAAAAATCCAATTCCGACGATTAG 1272 0.5362 MAGICCGVVGEGETPTPMEPSRPSRRRRLDVLPYKYIADMPVPPPEGGLKRQKLDPCAAAPPQARDCGNAVENCESCDDKNKKEQNKEPKGDKVQSTVSLFNSTATEVGNEDVKDCPKFGVTSVCGRRRDMEDAVSVRPSICQEPGQIQKEFHFFGVFDGHGCSHVATICKERLHEIVKEEVGGAGEDLEWKSLMEQSFARMDEEVQNWSQTNQRPTCRCELQTPHCDAVGSTAVVAIVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILGSDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAVCSAVDGSDKACSDASILLTKLALARHSSDNVSVVVVDLRREKQKSNSDD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1669 423 ProSitePatterns PPM-type phosphatase domain signature. 154 162 IPR000222 GO:0043169
Glsi10g1669 423 CDD PP2Cc 118 357 IPR001932 -
Glsi10g1669 423 Gene3D - 107 421 IPR036457 -
Glsi10g1669 423 FunFam Protein phosphatase 2C 37 113 419 - -
Glsi10g1669 423 SMART PP2C_4 106 410 IPR001932 -
Glsi10g1669 423 ProSiteProfiles PPM-type phosphatase domain profile. 118 412 IPR001932 -
Glsi10g1669 423 MobiDBLite consensus disorder prediction 39 64 - -
Glsi10g1669 423 SUPERFAMILY PP2C-like 117 413 IPR036457 -
Glsi10g1669 423 Pfam Protein phosphatase 2C 119 376 IPR001932 -
Glsi10g1669 423 PANTHER PROTEIN PHOSPHATASE 90 412 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1669 Glsi-ChrGlsi10 11238640 11240414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1669 1 421 PP2C-type Phosphatase Gene Family AT3G11410 58.661 1.52e-143 413