Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1664 ATGGAGGATTCTCAGTATTTGATGTGGATGAAGAGAAAACAAATCTTGAAGTCACATCTTCAAGCACCATTTGAGGTCTGCAACAACTCATGGGAAGAAAGGGCTTTTGCAGAAGACGCAGCTAGGATACTTGGCGGGTGCATATGGCCTCCAAGATCTTACTGTTGTAGTTTCTGTAAAAGAGAGTTCAGGTCTGCTCAAGCTCTAGGGGGTCACATGAATATCCACAGGAGGGATAGAGCTAGGCTTAAACAAAGTCTAAACCCCCTGCAGAGTGAAGGCCTTCATCATCACAACAATGATTGTTGTGTTAATCCTGCTGGTACTATTACAACAAGTAGCCTTTCTTCTTCTATGCTTTCAGCTAAATCCAAACGAGAAAAGTGCGGTCAGCATACCATATCTCCTTATGCTTCTTCTGTTAGCTGGGGACAGCATAGGGGATCTTTTAATTCAGAACCAGAAGAGGTAATCAACGGAAAGGAAGGAGATTTGAAAGGATTTTGTCATAATAATTATGTGGAAACAGGTTTGTCTATTGGATTGAATCCGATGCTTGGTCAAACATTACAAACTGGGTCATATGGGGATGAAGCCATCAGCTGTAAAAGATCTAAGACTTCCATTTCTTCACTGCCTTTGTTCCTCAAGCCATGCTCAAATGATAGACGCCTGGTTTTCCAATCAGCAGAAATCGTACTTGGACTTAAGCCTGGAATGGAAGACTTGGATCTTGAATTGAGGCTGGGGAAATCACAGAACGTGAAGTAG 771 0.4241 MEDSQYLMWMKRKQILKSHLQAPFEVCNNSWEERAFAEDAARILGGCIWPPRSYCCSFCKREFRSAQALGGHMNIHRRDRARLKQSLNPLQSEGLHHHNNDCCVNPAGTITTSSLSSSMLSAKSKREKCGQHTISPYASSVSWGQHRGSFNSEPEEVINGKEGDLKGFCHNNYVETGLSIGLNPMLGQTLQTGSYGDEAISCKRSKTSISSLPLFLKPCSNDRRLVFQSAEIVLGLKPGMEDLDLELRLGKSQNVK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1664 256 PANTHER OS07G0101800 PROTEIN 27 252 - -
Glsi10g1664 256 Pfam C2H2-type zinc finger 54 78 - -
Glsi10g1664 256 SUPERFAMILY beta-beta-alpha zinc fingers 51 80 IPR036236 -
Glsi10g1664 256 ProSitePatterns Zinc finger C2H2 type domain signature. 55 76 IPR013087 -
Glsi10g1664 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1664 Glsi-ChrGlsi10 11227227 11227997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1664 1 250 C2H2 Transcription Factor Family AT5G06070 35.849 1.16e-27 104