Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1659 ATGGCGGTGATGTTCCAGACCTCGGCATTCGATGCTTTGTCGGGACTTGCAGATAGTGACGTGTTCCCACTTGCTACTCCTTCACCACCTTACCCCACGCACCCACGCCCACGCCCACACCCACACCCACGCTACTGCAGCATTGGAACCCTTATTGAGATTAAAGAAGCCCGCCCCTCAAGCACCTACCCACGAGGCGCTCGAGCCATTTCACTCCGAGACCAGATAGACATTGACGGTAAAATCAGCTCTGGAAAAGGACGAGGGACCCCATCTGCTGACACGTACCAATCTGACCGTATTAGCGGCATAGTTAGAGGTACAAAAGCATACTCTTGTGTTTCTCACCCTCCCTTGCGGTTGTCAACTATGGCGAATCGGTGGTGGGCTGGAAACGTGGCAATAAGACCTACAGATCCCTTGTCGTCTTCTCCATCTCTTCAGCTGAGGAACCCAGAAGACGACCATGGTGGATTGAATCGACGTGGACCAAGACGAGAGCAAGAATTCCTGGACAACAACAATAACAGCACCAACGCCACCCCAACCAATAGCAGCAATAGCAACACTAACGCAAACACCACCTCGCAGAGCCAGAACGCCGAGGATGATGAGAGCCGAGACAACGAGCGGGAAGCCGATGATCAAAACCCAGGTTGTCATGACACGTTTGAGCCAGGTAGCAGCTGCCGCCGACCCCGAGGCCGGCCTCCGGGGTCGAAGAACAAACCAAAACCGCCCATAGTTATTACGAAGGAGAGCCCCAATGCGCTTCAGAGTCACGTGTTTGAAATCTGCAGTGGCAGCGATGTCGCGGAGAGCATTGCCACCTTCGCAAATCGCAGGCACCGAGGGGTAGCGGTGCTTAGTGGAAATGGCATTGTGACCAATGTTACGCTTCGGCAACCGGCTGCGCCTGGTGGGGTTATTACTCTACATGGAAGGTTCGAGATATTGTCTCTATCAGGTGCTTTTTTACCGGCACCTTCGCCACCTGGGGCAACTGGGCTAACCGTGTATTTGGCGGGTGGACAAGGGCAGGTTATTGGGGGCACTGTGATGGGTTCGCTGGTGGCATCGGGTCCTGTAATAGTGACTGCTGCTACATTTGCTAATGCTATTTATGAAAGGTTGCCGCCAGAGGATGAGCCAGCTGGGGAGGAACTGCAAGAGCAGCAGCAGCAGCAGCAATCAGGAGTAAATTCGGGAACTACTGGAATTTCAGCATCTCAAGGTTTGGGTGAACAAGTTTCAATGCCAATGTACAATAATTTGCCTCCAAATTTGCTACCAACTGGTCAGATGCCCCATGATGTATTCTGGGCTCCTTCAGCTCGGCCTCCTCCCTCTATGTTCAGAAGGTTTCTTGTAAGCATAGCAAGCAAGAGTTACATTAATGATTATGTAGTCAAGGATGGAAATGATCCAGATTCCAGAAATAAGATTGGAGCTTTGCAGGAATTTATGTGCCTGAAAAGTGACTGCTCTACGGCTCTCTCACACCTCGGGCTTCAGATTAAGGACATGGCGGCTGCTCGGGAAATTGGGGTGGCCGAATTCCTTCAGGGTACCTGCAGACAAAGATTGTTTTTGGTGAGAAAATCTCATAGACAGAGTAGTCATATGCTTTGGGGTATGCTTTGGGGTAGAAATCAAGTACCGGGTTCAACTAGAAAAGCCTTATCTTTGAGGTGCTGTGCTCAAACAAATCCCAGAGCTGTGGTTGCTGGGGGTGTGAGTAGCGCAGTGGACCAGCCGTCCAGCTTGGTCGAGAAGCCTGCCTTGGAAGTTTTTCATTTTTACAGGGTTCCATTGATCCAAGAAAGTGCTGCTGCTGAACTTCTCAGGGAAGTCCAAATGAAAATCTCAAATCAGATTGTGGACTTGCAAACAGAGCAATGCTTCAATATTGGGCTTGATTTGCGGCTTCCAAGTGAAAAGCTTTCTGTCCTTAAATGGCTTCTTCAAGAAACATATGAGCCTGAGAATCTGGGAACTGAGAGCTTTCTTCAGAAAAAAGGAAAGGAGGGTTTGAGAACTGTTATAATAGAGGTTGGCCCAAGGTTGTCATTTACTACAGCTTGGTCTGCTAATGCTGTTGCAATTTGCCGAGCATGTGGATTGACAGAGGTGACACGTTTGGAACGTTCAAGGCGGTACTTGTTGTATACAAAGGGTGAATTAAAAGATTATCAAATCAATGAATTTGCAGCAATGGTACATGATAGAATGACTGAATGTATTTATACTCAGAAGCTAACATCCTTTCAGACCAGTGTAGTTCCAGAGGAAGTCTGTTATATACCTGTAATGGAGAAGGGGCGAAAGGCATTAGAAGAAATAAATGAGGAAATGGGTTTAGCCTTTGATGATCAGGATCTACAATACTACACTAAACTTTTCAGAGAGGATATTGGGCGTGATCCAACAAATGTGGAATTATTTGATATTGCCCAGTCCAACAGTGAGCATAGCAGGCACTGGTTTTTTACTGGAAAGATTTTCATTGATGGACAGCTCATGAATAGGACTCTAATGCAGATTGTGAAAAGCACTTTGCAGGCAAATCCAAATAATTCAGTTATTGGATTTAAGGATAACTCTAGTGCAATCAGGGGCTTCCAAGTAAGGCAGTTGCGACCAGTTCAGCCTGGTTCAACATGTCCATTGAACATGACAGCGTGTGAGCTAGATATCTTGTTTACAGCCGAAACTCATAATTTTCCATGTGCAGTGGCACCTTATCCTGGTGCAGAGACAGGTACAGGAGGTCGCATTAGGGATACACATGCAACGGGAAGGGGCTCCTTTGTCCAGGCAGCGACAGCTGGTTATTGTGTTGGGAATCTCAACATGCCAGGGTCTTATGCTCCATGGGAAGATCCATCCTTTACTTATCCATCAAATTTAGCATCACCTTTGCAGATCCTTCTAGATTCTAGCAATGGCGCATCTGACTATGGCAACAAATTTGGAGAGCCATTGATTCAGGGCTTCTGTAGAACTTTTGGAATGAGACTTCCTAGTGGGGAAAGGCGGGAATGGTTGAAGCCAATTATGTTTAGTGGAGGCATTGGTCAGATTGACCATATCCATATATCAAAGGGAGAGCCTGAAATTGGAATGTTGGTTGTTAAGATTGGAGGTCCTGCTTATCGCATTGGGATGGGAGGTGGTGCAGCCTCAAGCTTGGTCAGTGGACAGAATAATGCAGAGCTTGATTTCAATGCTGTGCAACGTGGAGATGCTGAGATGGCACAAAAATTGTATCGTCTTGTTCGTGCTTGTATTGAGATGGGGGAGAAAAATCCAATTATCAGCATTCATGATCAGGGAGCTGGTGGGAATTGTAATGTTGTAAAGGAAATTATATACCCAAAGGGTGCTGAGATAGATATCAGAGCAATTGTGGTTGGTGATCACACGATGTCTGTTTTAGAAATTTGGGGTGCAGAATACCAGGAGCAGGATGCAATCTTGGTGAAGCCTGAAAATCGGAACCTTCTACAATCAATCTGTGATAGAGAAAAGGTTTCAATGGCTGTGATTGGAACTATTAGTGGTGATGGACGTGTTGTTTTAGTTGACAAATTAGAAACTCAGAAATGTCTTTCAAATGGACTTCCTCCACCTCCCCCTTCTGTGGATCTCGAACTAGAGAAAGTACTTGGTGACATGCCTCAGAAATATTTTGAATTCCATCGGGTTGTTGACAAGAGAGATCCATTTGATATTGCCCCAGGGGTCACAGTAATAGATTCTCTGAAGAGGATATTGAGTTTACCTTCTGTCTGTTCGAAACGTTTCTTGACAACAAAAGTTGATAGGTGTGTTACAGGTCTTGTCGCACAGCAGCAAACCGTTGGTCCTTTGCAGATTCCTCTTGCTGATGTTGCAGTTACTGCTCAGACCTTTACTGATGTGACTGGAGGTGCATGTGCCATTGGGGAGCAACCAATCAAAGGTCTGCTAGACCCCAAAGCAATGGCAAGGTTGGCTGTTGGAGAATCACTCACAAATCTTGTATGGGCAAAGGTCACTTCCCTTTCCGATGTTAAGGCAAGTGGTAATTGGATGTATGCTGCCAAGCTTGCTGGGGAAGGAGCTTCCATGTATGACGCTGCTATATCTTTGTCAGAAGCAATGATTGAACTTGGTATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCATGCAGGAGGTGAAGTCGTCAAGGCTCCAGGAAACCTTGTAATTAGTGTTTATGTCACCTGTCCTGATATTACAAAAACAGTGACTCCAGATTTGAAACTTGAAGATGATGGTATTTTACTTCATATTGATCTAGCAAAGGGAAAACGGCGGTTAGGTGGATCTGCTCTTGCCCAGGTGTTTGACCAAGTTGGGGATCAATGTCCTGATCTTGATGATGTTCCTTACTTCAAAAAGGTATTTGAAACTGTCCAAGATCTTCTTACAGATGAACTGATCTCTGCTGGTCATGACATCAGTGACGGTGGGCTGCTAGTCTGTGCCTTAGAGATGGCATTTGCTGGGAACTGTGGATTTATATTGGACGTGACTTCAAAAGGCAATAACCTTTTCCAAACTCTCTATGCAGAAGAGCTAGGGTTAATTGTTGAGGTAAGCAAGAAAAATCTAGATATTGTGATGTATAAGTTAAACAATGTGGGTGTTACTAGTGAGGTCATAGGACAAGTAACTGCTGCTCCATTGATAAAAGTTAAGGTTGATGGGGTGACTCATTTAGAAGAAAAAACTTATATCCTCAGGGATATGTGGGAAGAAACCAGTTTTCAGCTAGAAAAGTTCCAAAGATTGGCATCTTGTGTTGATATGGAGAGAGAAGGATTGAAACAACGATATGCGCCGTCATGGAAACTGTCCTTTTCTCCTTCTTTCACCAACAAAATGTACATGTCTGCAACTTCAAAACCAAAAGTTGCTGTGATTAGAGAAGAAGGAAGCAATGGAGACAGAGAAATGGCTGCGGCATTTTGTGCTGCTGGTTTTGAACCATGGGATGTTACAATGTCAGACCTTCTTAATGGAGTAACCTCTTTGCAAGAGTTTCGTGGAATTGTGTTTGTTGGTGGATTTAGCTATGCTGACGTGCTTGATTCTGCCAAAGGATGGTCTGCTTGTGTAAGATTCAATGAGCCCCTTCTAAAGCAATTTCAAGAGTTTTACAACCGTCCAGACACTTTCAGTCTTGGGGTTTGCAATGGGTGTCAACTAATGGCTTTGCTGGGATGGGTACCAGGCCCACAAGTTGGAGGTGTTCTTGGTGCTGGTGGGGACCTATCACAACCAAGGTTCATTCACAATGAGTCTGGGCGGTTTGAGTGCCGCTTTACAAGCGTGACAATAAAGGACTCACCGGCTATAATGTTTAAAGGTATGGAGGGTAGTACACTTGGGGTATGGGCTGCTCATGGCGAGGGAAAAGCATATTTCCCAGATGAAGGTGTGCTGGATCGTATAGTTCATTCGGAGTTAGCTCCTTTAAGATACTGTGATGATGGGGGCAATCCAACTGAAATATATCCTTTCAATGTGAATGGCTCTCCTTTAGGGGTTGCAGCTATTTGTTCCCCAAATGGGCGGCATCTTGCGATGATGCCTCATCCTGAACGTTGTTTCTTAATGTGGCAGTTTCCATGGTATCCAAAGCACTGGGATGTGGACAGAAAGGGGCCTAGCCCATGGCTGCGCATGTTCCAGAATGCTAGAGAGTGGTGTTCTTGA 5757 0.4579 MAVMFQTSAFDALSGLADSDVFPLATPSPPYPTHPRPRPHPHPRYCSIGTLIEIKEARPSSTYPRGARAISLRDQIDIDGKISSGKGRGTPSADTYQSDRISGIVRGTKAYSCVSHPPLRLSTMANRWWAGNVAIRPTDPLSSSPSLQLRNPEDDHGGLNRRGPRREQEFLDNNNNSTNATPTNSSNSNTNANTTSQSQNAEDDESRDNEREADDQNPGCHDTFEPGSSCRRPRGRPPGSKNKPKPPIVITKESPNALQSHVFEICSGSDVAESIATFANRRHRGVAVLSGNGIVTNVTLRQPAAPGGVITLHGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVIGGTVMGSLVASGPVIVTAATFANAIYERLPPEDEPAGEELQEQQQQQQSGVNSGTTGISASQGLGEQVSMPMYNNLPPNLLPTGQMPHDVFWAPSARPPPSMFRRFLVSIASKSYINDYVVKDGNDPDSRNKIGALQEFMCLKSDCSTALSHLGLQIKDMAAAREIGVAEFLQGTCRQRLFLVRKSHRQSSHMLWGMLWGRNQVPGSTRKALSLRCCAQTNPRAVVAGGVSSAVDQPSSLVEKPALEVFHFYRVPLIQESAAAELLREVQMKISNQIVDLQTEQCFNIGLDLRLPSEKLSVLKWLLQETYEPENLGTESFLQKKGKEGLRTVIIEVGPRLSFTTAWSANAVAICRACGLTEVTRLERSRRYLLYTKGELKDYQINEFAAMVHDRMTECIYTQKLTSFQTSVVPEEVCYIPVMEKGRKALEEINEEMGLAFDDQDLQYYTKLFREDIGRDPTNVELFDIAQSNSEHSRHWFFTGKIFIDGQLMNRTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFQVRQLRPVQPGSTCPLNMTACELDILFTAETHNFPCAVAPYPGAETGTGGRIRDTHATGRGSFVQAATAGYCVGNLNMPGSYAPWEDPSFTYPSNLASPLQILLDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSGGIGQIDHIHISKGEPEIGMLVVKIGGPAYRIGMGGGAASSLVSGQNNAELDFNAVQRGDAEMAQKLYRLVRACIEMGEKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIVVGDHTMSVLEIWGAEYQEQDAILVKPENRNLLQSICDREKVSMAVIGTISGDGRVVLVDKLETQKCLSNGLPPPPPSVDLELEKVLGDMPQKYFEFHRVVDKRDPFDIAPGVTVIDSLKRILSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDVTGGACAIGEQPIKGLLDPKAMARLAVGESLTNLVWAKVTSLSDVKASGNWMYAAKLAGEGASMYDAAISLSEAMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDDGILLHIDLAKGKRRLGGSALAQVFDQVGDQCPDLDDVPYFKKVFETVQDLLTDELISAGHDISDGGLLVCALEMAFAGNCGFILDVTSKGNNLFQTLYAEELGLIVEVSKKNLDIVMYKLNNVGVTSEVIGQVTAAPLIKVKVDGVTHLEEKTYILRDMWEETSFQLEKFQRLASCVDMEREGLKQRYAPSWKLSFSPSFTNKMYMSATSKPKVAVIREEGSNGDREMAAAFCAAGFEPWDVTMSDLLNGVTSLQEFRGIVFVGGFSYADVLDSAKGWSACVRFNEPLLKQFQEFYNRPDTFSLGVCNGCQLMALLGWVPGPQVGGVLGAGGDLSQPRFIHNESGRFECRFTSVTIKDSPAIMFKGMEGSTLGVWAAHGEGKAYFPDEGVLDRIVHSELAPLRYCDDGGNPTEIYPFNVNGSPLGVAAICSPNGRHLAMMPHPERCFLMWQFPWYPKHWDVDRKGPSPWLRMFQNAREWCS 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1659 1918 FunFam Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 1427 1592 - -
Glsi10g1659 1918 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 761 821 - -
Glsi10g1659 1918 CDD GATase1_FGAR_AT 1651 1914 - -
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 201 219 - -
Glsi10g1659 1918 Gene3D - 259 397 - -
Glsi10g1659 1918 FunFam Phosphoribosylformylglycinamidine synthase, putative 1237 1421 - -
Glsi10g1659 1918 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 637 752 IPR040707 -
Glsi10g1659 1918 SUPERFAMILY PurM N-terminal domain-like 1250 1429 IPR036921 -
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 381 410 - -
Glsi10g1659 1918 Pfam AIR synthase related protein, C-terminal domain 1040 1195 IPR010918 -
Glsi10g1659 1918 Pfam AIR synthase related protein, C-terminal domain 1451 1580 IPR010918 -
Glsi10g1659 1918 SUPERFAMILY Class I glutamine amidotransferase-like 1646 1917 IPR029062 -
Glsi10g1659 1918 SUPERFAMILY PurM C-terminal domain-like 1436 1634 IPR036676 -
Glsi10g1659 1918 FunFam AT-hook motif nuclear-localized protein 258 385 - -
Glsi10g1659 1918 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 597 1918 IPR010073 GO:0004642|GO:0006189
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 389 410 - -
Glsi10g1659 1918 NCBIfam phosphoribosylformylglycinamidine synthase 600 1916 IPR010073 GO:0004642|GO:0006189
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 170 200 - -
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 154 169 - -
Glsi10g1659 1918 Gene3D - 1593 1918 IPR029062 -
Glsi10g1659 1918 ProSiteProfiles PPC domain profile profile. 255 393 IPR005175 -
Glsi10g1659 1918 FunFam Phosphoribosylformylglycinamidine synthase, putative 1028 1206 - -
Glsi10g1659 1918 Gene3D - 1422 1592 IPR036676 -
Glsi10g1659 1918 Gene3D - 1029 1204 IPR036676 -
Glsi10g1659 1918 SUPERFAMILY AF0104/ALDC/Ptd012-like 256 383 - -
Glsi10g1659 1918 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1650 1894 - -
Glsi10g1659 1918 CDD PurL_repeat1 813 1200 - -
Glsi10g1659 1918 SMART GATase_5_2 1648 1917 - -
Glsi10g1659 1918 Pfam Plants and Prokaryotes Conserved (PCC) domain 260 371 IPR005175 -
Glsi10g1659 1918 FunFam Probable phosphoribosylformylglycinamidine synthase 822 1027 - -
Glsi10g1659 1918 CDD DUF296 261 370 IPR005175 -
Glsi10g1659 1918 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 597 1918 - -
Glsi10g1659 1918 FunFam Putative phosphoribosylformylglycinamidine synthase 761 821 - -
Glsi10g1659 1918 FunFam Phosphoribosylformylglycinamidine synthase, putative 1593 1918 - -
Glsi10g1659 1918 SUPERFAMILY PurM C-terminal domain-like 1038 1272 IPR036676 -
Glsi10g1659 1918 Gene3D - 822 1028 IPR036921 -
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 138 254 - -
Glsi10g1659 1918 MobiDBLite consensus disorder prediction 79 98 - -
Glsi10g1659 1918 Pfam CobB/CobQ-like glutamine amidotransferase domain 1648 1917 - -
Glsi10g1659 1918 CDD PurL_repeat2 1297 1570 - -
Glsi10g1659 1918 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 778 827 IPR041609 -
Glsi10g1659 1918 SUPERFAMILY PurM N-terminal domain-like 829 1036 IPR036921 -
Glsi10g1659 1918 SUPERFAMILY PurS-like 598 756 IPR036604 -
Glsi10g1659 1918 Gene3D - 1236 1421 IPR036921 -
Glsi10g1659 1918 SUPERFAMILY FGAM synthase PurL, linker domain 761 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1659 Glsi-ChrGlsi10 11178672 11191302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1659 124 450 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.020 9.34e-68 229