Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1658 ATGCACAAGTACAGGCTTAGGACAACGACAAGGTTTGGCTCTTCATGTGGAGCATGCAAGTTCCTCAGGAGAAAGTGCACAACTGATTGTATATTCGCTCCTTACTTCTCCTATGACCAGGCAGCAACCCATTTTGCAGCAGTGCACAAGGTTTTTGGCGCTAGTAACATCTCTAGGCTATTGCTACACCTACCAGTGCAGAATAGAAGTGATGCTGCCATCACTGTATCTTATGAAGCACTGGCTCGGATGCAGGATCCTATATATGGTTGTGTTGCTCAAATCTTGGCACTGCAGCAACAGGTTGCCAGCTTGCAAGAGGAAATAGATAATCTTGGAAATCTTCTGACCAATTCTACTGTTGGTATAGACAGTTGTGGCAGTTCTCAAGCACCAACAAACAGAAACTCAAACGAGTTAGAATTTTCTTGGCAGCATGATACAAGTACACAAATTTATCATAATCAACTGGCTAATCTACTTTCTCACGAAGGAAGTGCTGTAGCCTACCAAGGCTTGGAAAGGCAGCTGAATTTAGAGCTTCCCAGTGCACTTCAATTGGAAGACCAATTATTTGAGGAGTTTGACCCTAATTTATTAGAGCACCTCCTATCAGGAATTGATGAAAAGATTTTCATAAATCATCCATGGTCCAACAATAATGCTGACATCAAAAACTAA 681 0.42 MHKYRLRTTTRFGSSCGACKFLRRKCTTDCIFAPYFSYDQAATHFAAVHKVFGASNISRLLLHLPVQNRSDAAITVSYEALARMQDPIYGCVAQILALQQQVASLQEEIDNLGNLLTNSTVGIDSCGSSQAPTNRNSNELEFSWQHDTSTQIYHNQLANLLSHEGSAVAYQGLERQLNLELPSALQLEDQLFEEFDPNLLEHLLSGIDEKIFINHPWSNNNADIKN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1658 226 Coils Coil 95 115 - -
Glsi10g1658 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 160 - -
Glsi10g1658 226 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Glsi10g1658 226 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1658 Glsi-ChrGlsi10 11176273 11177061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1658 13 118 AS2 family AT5G06080 71.698 3.94e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi10g1658 LOB 1.5e-35 No_clan