Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1624 ATGGCTAGCGTCGCCGCAGCCGTTGTGGAAGTGGACGAGCCCAGGGAGATCCATGAAGAGGAGCAACGGACCGGAGCCCGATATATATGGACTGGAACGGAGCCCAGTTATAAAAAAATAAGAACCCTAAATCACAAACTCGCTCCATTTGATAAAAACCCTCGCTGCTTAGCGCCGATCTCTGCTTCGGCATCAACCAGGGAGTGTCGTCAACCAACAAAGATGGTAAAGGGGCGCCAAGGAGAGCGAGTCAGGCTTTATGTCAGAGGCTCAATCCTCGGATACAAGAGGTCCAAATCAAACCAATACCCAAACACATCACTTATCCAGATTGAGGGAGTAAACACCAAAGAGGAGGTTGCATGGTACTGTGGCAAGCGTATGGCATACATTTACAAGGCCAAGGTGAAGAAGAATGGAAGCCATTATCGCTGCATTTGGGGTAAGGTTATCAGGCCTCATGGTAACAGTGGTATCGTCCGTGCCAAATTCAAGTCTAATCTGCCACCTAGATCAATGGGAGCAAGGGTTAGAGTCTTTATGTACCCGAGCAATATATGA 561 0.4848 MASVAAAVVEVDEPREIHEEEQRTGARYIWTGTEPSYKKIRTLNHKLAPFDKNPRCLAPISASASTRECRQPTKMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVIRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1624 186 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 88 180 IPR001780 GO:0003735|GO:0005840|GO:0006412
Glsi10g1624 186 SUPERFAMILY Translation proteins 86 180 IPR009000 -
Glsi10g1624 186 ProSitePatterns Ribosomal protein L35Ae signature. 148 169 IPR018266 GO:0003735|GO:0005840|GO:0006412
Glsi10g1624 186 PANTHER 60S RIBOSOMAL PROTEIN L35A 76 186 IPR001780 GO:0003735|GO:0005840|GO:0006412
Glsi10g1624 186 FunFam 60S ribosomal protein L35a 81 186 - -
Glsi10g1624 186 Pfam Ribosomal protein L35Ae 86 180 IPR001780 GO:0003735|GO:0005840|GO:0006412
Glsi10g1624 186 Gene3D translation elongation factor selb, chain A, domain 4 80 186 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1624 Glsi-ChrGlsi10 10905719 10908329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1624 75 186 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 89.286 2.08e-73 215
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1624 10 10905719 10908329 Glsi10g1624 10 10905719 10908329 ECH