Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1612 ATGCCTCCTTCTACCCCAAATCTACTCTCCAAATGCACTGTCTACCCTGAACAAAAGTCCTCCCTCGGAGACCTCAAGCTCTCCGTCTCTGACCTTCCCATGCTTTCCTGCCACTATATCCAAAAGGGTTGCCTCTTCACTCCCCCTTCTCTCCCCTTCCACTCTCTCGTACCTATCCTCAAGTCTGCTCTCTCTCGCACTCTCTCTCTCTTCCCCCCTCTTGCCGGCCGCTTGAAGACCGATTCTGATGGATACGTCTACGTCACCTGCAACGACGCCGGCGTCGATTTTCTCCACGTCAGTGCCACAGGATTCTTCATTCGTGACCTCTTGGCCCCACCTTATGTCCCCGCCGACTCCTTCAAGGAATTATTCTCCTTTGACAGAAAGGTGAGCTATTCAGGCCATTTCAGCCCCATCATGGCCGTTCAGGTCACTGAACTTGCGGACGGCGTGTTCATCGGCTGCGCTGTGAACCACGCCGTCGCAGACGGCACGTCCTTCTGGAATTTCTTCAATACATTCGCCGAAGTGTGTAGAGGAGCCAAGAAGATCTCCAATGTACCGGATTTCCGCCGGGATTCGGTTTTGATTTCAAAAGCAGTGCTGCGGTTGCCGGAAGGTGGGCCCAACATCACGTTCAACCCCGACGAGCCTTTGCGGGAGAGAATTTTCAGCTTCAGCCGTGAAGCCATTCAGAAGCTGAAAGCGAGAGTGAATAACCAGAAACGGACGGTGAACGAGGAGATTAACGCCGTAGAATTAATTGGGAAGCAAAGCAACGATAATTATCACAATGAAAACGGCAAGGTGACGAAGATCCTCGAAAACTGGACGAAGAGTGGCGTTTCCAATCCGCAAGTTGGCGAAATTATGCATAACGACACGGGTGACATTTCGTCGTTCCAGTCACTGTGTGCGCTGCTCTGGCGTGGCGTGACACGTGCCAGGAAGTTGCGTCCATCTAAAACGACGACGTTTAAAATGGCGGTGAACGTTCGTCCCAGGTTAGAGCCCAAGCTGGATCCGTACTACTTCGGGAATGCGATTCAGAGCATAGCGACGAATGCCAGCGTGGGGGACGTACTGTCTCGGGATCTACGGTGGTGCGCGGAGGAGTTGAACAAGAGCGTGAAGGCTCACGATGACGTCACGGTGCGGCGGCACGTAGAGGATTGGGAGAGTAACCCGAGGTGCTTCCCGCTAGGGAACTCCGACGGTGCATCAATAACCATGGGGAGCTCGCCCAGATTCCCAATGTACGAGAACGATTTCGGGTGGGGGCGACCGGTGGCGGTCCGTAGCGGGGGTGCAAACAAATTTGACGGTAAGATATCGGCGTTTCCAGGGAGAGATGGGAGTGGGAGCGTGGATTTGGAGGTGGTTTTGGCGCCCGAAACGATGGCGGGGTTGGAATCCGACACCGAGTTCATGCTATACGTATCGAACTCATCCTATGCCTTCGATCGTGTCTGA 1476 0.54 MPPSTPNLLSKCTVYPEQKSSLGDLKLSVSDLPMLSCHYIQKGCLFTPPSLPFHSLVPILKSALSRTLSLFPPLAGRLKTDSDGYVYVTCNDAGVDFLHVSATGFFIRDLLAPPYVPADSFKELFSFDRKVSYSGHFSPIMAVQVTELADGVFIGCAVNHAVADGTSFWNFFNTFAEVCRGAKKISNVPDFRRDSVLISKAVLRLPEGGPNITFNPDEPLRERIFSFSREAIQKLKARVNNQKRTVNEEINAVELIGKQSNDNYHNENGKVTKILENWTKSGVSNPQVGEIMHNDTGDISSFQSLCALLWRGVTRARKLRPSKTTTFKMAVNVRPRLEPKLDPYYFGNAIQSIATNASVGDVLSRDLRWCAEELNKSVKAHDDVTVRRHVEDWESNPRCFPLGNSDGASITMGSSPRFPMYENDFGWGRPVAVRSGGANKFDGKISAFPGRDGSGSVDLEVVLAPETMAGLESDTEFMLYVSNSSYAFDRV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1612 491 Gene3D - 7 204 IPR023213 -
Glsi10g1612 491 SUPERFAMILY CoA-dependent acyltransferases 57 181 - -
Glsi10g1612 491 Coils Coil 229 252 - -
Glsi10g1612 491 Gene3D - 209 473 IPR023213 -
Glsi10g1612 491 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 478 - -
Glsi10g1612 491 Pfam Transferase family 10 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1612 Glsi-ChrGlsi10 10825918 10827393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1612 59 472 Monolignol Biosynthesis Gene Families AT5G48930 27.021 2.49e-34 132