Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1595 ATGATCCACTACATTTCCATGATCAATTTTCTGTTCTGCATAACTTCACAAACCTTGTGGCACATGCCATTGGCAACTAGAGCTGCCAAGGCCACGGGTGCAGAGACTAATAGACTTGCTTTGATTGCTTTGAAGGATAATCTAACGAACGGCATTCCTGAAGCTCTGCCTTCATGGAATGATTCTCTCCACTTCTGTCAATGGCAGGGTGTTTCATGCAGTCCCCGCCACACGAGAGTCTCTGCCTTGAATCTGACATATCAAAATTTGGGCGGGACTCTTGCACCTGCCTTAGGAAATTTAACATTCCTGAAACTTGTCAATCTTTCATACAATGGATTGCATGGTCAAATTCCCAAACAAGTTGGCCGTCTCAAAAGGTTGCAGCTTCTCCATTTATCCCATAATAATCTCGAGGGAGAGGTCTCTATAGAGCTGGCTAACTGTTCAAAACTCCAGATGATCATCTTTAGTTACAATAACCTGACCGGCAGAGTTCCCTCCTGGTTTGGATCCATGCTGCATCTTACTCACTTGTCTCTTGATGCCAATAAATTTTTTGGTAATATCCCATCTTCCTTGGGAAATCTTTGGTCATTGGAGGTCATGTCTCTTGCTGTTAATAATTTGGAAGGAAGTATACCTGAAACTATAGGTGGGCTGTCAAATTTGAACTGGCTTGATATGGGAAATAATAGCTTGTCTGGTATGATCCCTCCTTCGTTTTACAATCTTTCCAACATTAAATATATTCATTTGACCTTTAACCACTTGTTAGGGACTATCTCATCAAATATAGACCTCGCTTTCCCCAATCTTCAAATATTTGTTGTTGGAGATAACTTTTTAACTGGAACTCTTCCGGCTTCATTATCCAACATCTCTCAATTGCAAATATTGGATGTATTTTATAATGGTTTTAGTGGGCCAGTTCCTACCACTCTGGGAAGCTTGAAGAACCTTCGCGAATTAATTATCGATTTTAATCATTTTGGTAGTGGAGGAGGTCATGATTTGGATTTCCTTGCATCATTAACCAACTGTAGTCAATTGCATCTCTTGGGGATGCAAAAAAATGGATTTGGTGGTGTATTGCCAGATTCAATTGGGAATTTCTCTTCGCGGCTTGATACACTTCTTATGGGACACAATCAGATCACTGGAAGCGTACCTGAAGAGATTGGGCAACTAGTTGGCTTAAGATTTCTTGATGTGGGAGGCAACTTCCTTCAAGGCATAATTCCAGATTCGATTGGGAAGCTTCAAAATCTTGGAAGAATGTACTTTCAGAAAAACCAGTTATCTGGAAATATTCCTGCTGTCCTTGGCAATCTTACTATGTTGTTTGATCTTTATTTGGACATCAACAATTTTGAAGGAAGCATTCCATCTACCCTCAAACATTGCAAAGGTATGCAGTACTTGTTCCTTTCTCAAAACAACTTGAGTGGTAATATACCCAATTCTACATTTGGTCTGCAAGAAGAGTTGATAGTTCTTAACATGTCCTTTAATTCCTTGACTGGTCCCCTTCCATCAGAGTTTGGTAATCTGAAGCACCTAGTGGAATTAGGTCTTAATGAAAACAAGTTGTCTGGTGATATTCCAATGGAACTTGGTGAATGTACAGAGTTGGCATTGCTTGGACTGCGAGGAAACTTCTTCCAAGGCAGTATTCCTGCATCCTTCAGTTCTTTAAAATCCCTCGAAAGCTTAGATCTTTCCAAAAATAACTTGTCGGGTACTGACACTTTGCTCTCCAACCCACCTGAAGCTTTATCTGAGATTCCAAGTAACGTTCTTCTTAATGAGGACATGGTTGCCCACTTGGGAGACTTTGGGTTAGCTAGGCTCCTTCACAGGGTTACTGGCTATCCACGGGGAGATCAAACTACATCCTCTGCAATCAAGGGAACCCTTGGGTATATACCTCCTGGTACGATTCTTTTAATCTTGTTAAGAAATGATGTTTGGCCAGAGTATGGAGCAGGTTTCCCGGTGTCACCACAAGGGGATATCTACAGCTATGGAGTTCTTCTGTTGGAGATGCTCACTGGAAAGAAGCCGACAGATAGCATGTTCGGTGAGGATCTGAGCTTACACAAGTTCTGTAAGTTGGCATTGCCTGAAGGAATAATTGAGATAGTGGATTCATGTTTGCTTGTTCCAATGGATAAAGACCACAGGGAGGTTATACAGAGGCCAAATATAGAACTTAAAATTCGAGAATCTTTAGTGACCTTTGCTAGGATTGGTGTGGCATGTTCTGCAGAATTACCCAGTGAACGAATGGGGATCAAAGATGTTATAGTGGAGTTGCTTGCTATTAAAGAGAGGCTGTCCCGACCGTGTACCAAGCTTGTGATACGAAATTAG 2376 0.4137 MIHYISMINFLFCITSQTLWHMPLATRAAKATGAETNRLALIALKDNLTNGIPEALPSWNDSLHFCQWQGVSCSPRHTRVSALNLTYQNLGGTLAPALGNLTFLKLVNLSYNGLHGQIPKQVGRLKRLQLLHLSHNNLEGEVSIELANCSKLQMIIFSYNNLTGRVPSWFGSMLHLTHLSLDANKFFGNIPSSLGNLWSLEVMSLAVNNLEGSIPETIGGLSNLNWLDMGNNSLSGMIPPSFYNLSNIKYIHLTFNHLLGTISSNIDLAFPNLQIFVVGDNFLTGTLPASLSNISQLQILDVFYNGFSGPVPTTLGSLKNLRELIIDFNHFGSGGGHDLDFLASLTNCSQLHLLGMQKNGFGGVLPDSIGNFSSRLDTLLMGHNQITGSVPEEIGQLVGLRFLDVGGNFLQGIIPDSIGKLQNLGRMYFQKNQLSGNIPAVLGNLTMLFDLYLDINNFEGSIPSTLKHCKGMQYLFLSQNNLSGNIPNSTFGLQEELIVLNMSFNSLTGPLPSEFGNLKHLVELGLNENKLSGDIPMELGECTELALLGLRGNFFQGSIPASFSSLKSLESLDLSKNNLSGTDTLLSNPPEALSEIPSNVLLNEDMVAHLGDFGLARLLHRVTGYPRGDQTTSSAIKGTLGYIPPGTILLILLRNDVWPEYGAGFPVSPQGDIYSYGVLLLEMLTGKKPTDSMFGEDLSLHKFCKLALPEGIIEIVDSCLLVPMDKDHREVIQRPNIELKIRESLVTFARIGVACSAELPSERMGIKDVIVELLAIKERLSRPCTKLVIRN 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1595 791 Gene3D Transferase(Phosphotransferase) domain 1 597 786 - -
Glsi10g1595 791 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 74 335 - -
Glsi10g1595 791 Pfam Protein kinase domain 597 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1595 791 SUPERFAMILY Protein kinase-like (PK-like) 597 771 IPR011009 -
Glsi10g1595 791 Gene3D Ribonuclease Inhibitor 338 596 IPR032675 -
Glsi10g1595 791 Pfam Leucine Rich Repeat 400 421 IPR001611 GO:0005515
Glsi10g1595 791 ProSiteProfiles Protein kinase domain profile. 361 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1595 791 SUPERFAMILY L domain-like 344 590 - -
Glsi10g1595 791 Gene3D Ribonuclease Inhibitor 199 335 IPR032675 -
Glsi10g1595 791 FunFam Inactive leucine-rich repeat receptor-like protein kinase 343 603 - -
Glsi10g1595 791 Pfam Leucine rich repeat 199 258 IPR001611 GO:0005515
Glsi10g1595 791 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Glsi10g1595 791 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Glsi10g1595 791 SUPERFAMILY L domain-like 36 331 - -
Glsi10g1595 791 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 597 773 - -
Glsi10g1595 791 ProSiteProfiles Leucine-rich repeat profile. 568 589 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1595 Glsi-ChrGlsi10 10707773 10715673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1595 565 782 Receptor kinase-like Gene Family AT3G47570 35.747 1.25e-31 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi10g1595 Pkinase 1.5e-09 CL0016