Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1590 ATGAATTTAGAATCAACATTCAGCTCAGTTTTCTTTCTTCTGAGTTTCTTACATTGCGTTACCATTGCTATTCCCTCTGCCACAGATTCTCTTGCTCTGTTGGCCTTCAAGTCAAACATTCATGACCCTCGAGGAGTAGTGAGCTCCTGGAATGAATCTCTTTACTTCTGCGAGTGGGAAGGCGTTACTTGTGGTCGCAGGCATCAAAGAGTCACTAAACTAGATTTACCTTCAAGTGGATTGGTCGGTCACTTGTCTCCTCACCTAGGCAACCTCAGCTTCCTTAGGGAAATTGACCTCCACAATAATACCATCCAAGATGAAATTCCCGACGAGTTCAGTTATCTATTCAGGTTACGAAAGCTCAATCTAGCCAATAACTCCCTGGTTGGGAACATCCCGGCAAATCTGTCACGCTGCACCCAACTTAACTACATTAATCTGGGTCACAACCACCTCGTTGGAAAGATTCCCTTTGAGTTACAGTTCCTGACCAACCTCCAAATTTTGGGATTACACGAAAACCGTTTTGTTGGAGGCATCCCATCATTTCTTGGGAACCTTACCTCTCTTGTATCTCTGTCTCTAGCACATAACTTTCTTGGGGGAAGCATTCCTGATGAATTGGGTCGGTTGAAGAACTTGACACAGCTGGGACTAGGTGATAACAACTTGTCTGGTATTATTCCTCCGTCCATATACAACCTTTCCTCCATTACTGTTTTCTCTTTGTCTCAGAATGGTCTTCGTGGCAGTCTTCCACCCAACTTGGGCCTTTTTTTTCCTCGTCTCCAACTATTTGAAATCTCCGCAAACTTCTTTAGCGGATCCATTCCGACTTCACTATCCAATGCTTCAAATCTTCAAATTTTCGACATTTTCAATAATAGTTTTGGTGGAAAAGTTTCAGTTAATTTTGGAGGCATGCTACAACTAAACAACCTAAATTTGGCTGTTAATGTTCTCGGTAGCGGGGAGCCTGATGAAATGAGCTTTCTGACTTCTTTAGTCAATTGCAGCAATCTGCAATCCTTACAGTTTGGTGCAAATAAATTCACGGGCGTATTGCCTGATTCTATTGCTAATCTCTCCTCCAAACTTGAAATTTTTTTGATGAATAGCAATCAGCTATATGGGGCCATTCCTTCAGGGATAGGAAATCTAGTCAACTTATATTCGTTGGGCATGGAGTTTAACCAGTTCACAGGTTCAATTCCAGCAGAATTTGGCAAGCTTCAGAAGCTACAATGGACATCTCTAGAGGGCAACAAACTCTCGGGCGAGATTCCTTTTTCTCTTGGGAATCTAATATCTTTGACAGAGCTTCTCCTGCGGAGAAACAAATTACAGAAAACTATTCCACCTAGTTTAGGACAATGCCGAAGCCTGTTAACTTTAGATCTTTCCAAAAATGAACTTGCCGGACCCATACCCGAACAAATCCTTGATGTTTCGTTTCTGTCTGTTTTAGTGACCTTGAACCTCAGTAATAATCATTTGGTTGGATCTATACCTCAGAGTATTGGTAAACTGAAGAATATTATGACACTTGACGTATCAGAGAACAGGCTCTCTGATGAAATTCCAGGAGACTTGATTTATTGTACTAGCCTTGAAAACTTACACATGCAGGGTAACTTGCTCGAGGGGCTGGTTCCTCAATCCTTGAATTCTTTGAAAGGAATTCAACCCGTTGATATCTCACGTAACAAGTTTTCTGGGCAAATTCCTGCCTTCTTGGAAACTCTTCCTTTGAAATATCTAAATTTGTCCTTCAATGATTTTGAGGGTGAAGTACCATCTAAAGGATTATTTGCAAATGCCAGTGCAATATCAGTTGTTGGGAATAAAAGGCTATGTGGGGGCATTTCCGAACTAGGATTGCCCAAATGCCCAAAGCAACAAAACATGTCTCTTGTATCCAAAATACTCATCTCACTGTCTTGTGCCTTTATCGGAGTAGCAATTTTGACATGTTTAATCTTTTGGGCCTTCAGAAGGAGGAGAGTTCGACAATCCTCTGCAGCTGTGCTGAGGAAAGAACTTGTTCAAGTGTCTTACAATGATCTCCTTAGAGCAACTGATGGATTTTCCTCAGCAAACTTGATTGGTGAAGGCAACTTTAGTTCTGTGTACAAGGGAATCCTTGATAAGTTAGGAAGAGAATTTGTCGCCATCAAAGTTCTAAAGCTTCAAAACAAGAAAGCCGCGAAGAGTTTCATGGCTGAGTGCAAAGCCTTTACGGCTATTCGCCACAGGAATCTTATCAAGGTCATCACTTGCTGTTCCTCTGTTGATTTCCAGGGCAATGATTTTAAAGCAGTAGTTTATCAGTTAATGACTAATGGAAGCCTGGATACCTGGTTGCATCCAGTGGCACAAGATGGCAGGCAAGTTGAAGAATCACAAAGACTAGGGCTTGTTCAGAGAATCAACATTGCTATTGATGTGGCTTGTGCAATTGACTATCTTCATCACCAAAACCCAAGGAAAATAATCCATTGTGATCTAAAACCAAGCAATATTCTTCTTGATGCCGACATGACTGCACATGTTGGGGATTTTGGGCTTGTGAGGTTTCTCTCAGAGCCCTCAATCACAAATGAAAGCAGTTCCGTTGGAGTGAAAGGAACCATTGGGTATGCAGCTCCAGGGAAAAGACCAACTGACGCAATTTTTGAGCGAGGCCTAAATCTGCATAGTCATGCTAGGATGGCCTTACCCGATCAGGTGATGGCTATTGTGGACCCATTGCTTCTGAACAATGGAACAGAAGATTCAATAAACAAGGCATGCCTAGAATCCCTTGTACGAATTGGGGTGTCATGTTCAGTGGAGTTACCACAAGAAAGGATGGACACGAGGGATGTCATAGTTGAGTTGCAAAAGATCAAGGACAGGCTCGTCAAGCGTGGAAGATCCGGGCGTTAA 2931 0.4227 MNLESTFSSVFFLLSFLHCVTIAIPSATDSLALLAFKSNIHDPRGVVSSWNESLYFCEWEGVTCGRRHQRVTKLDLPSSGLVGHLSPHLGNLSFLREIDLHNNTIQDEIPDEFSYLFRLRKLNLANNSLVGNIPANLSRCTQLNYINLGHNHLVGKIPFELQFLTNLQILGLHENRFVGGIPSFLGNLTSLVSLSLAHNFLGGSIPDELGRLKNLTQLGLGDNNLSGIIPPSIYNLSSITVFSLSQNGLRGSLPPNLGLFFPRLQLFEISANFFSGSIPTSLSNASNLQIFDIFNNSFGGKVSVNFGGMLQLNNLNLAVNVLGSGEPDEMSFLTSLVNCSNLQSLQFGANKFTGVLPDSIANLSSKLEIFLMNSNQLYGAIPSGIGNLVNLYSLGMEFNQFTGSIPAEFGKLQKLQWTSLEGNKLSGEIPFSLGNLISLTELLLRRNKLQKTIPPSLGQCRSLLTLDLSKNELAGPIPEQILDVSFLSVLVTLNLSNNHLVGSIPQSIGKLKNIMTLDVSENRLSDEIPGDLIYCTSLENLHMQGNLLEGLVPQSLNSLKGIQPVDISRNKFSGQIPAFLETLPLKYLNLSFNDFEGEVPSKGLFANASAISVVGNKRLCGGISELGLPKCPKQQNMSLVSKILISLSCAFIGVAILTCLIFWAFRRRRVRQSSAAVLRKELVQVSYNDLLRATDGFSSANLIGEGNFSSVYKGILDKLGREFVAIKVLKLQNKKAAKSFMAECKAFTAIRHRNLIKVITCCSSVDFQGNDFKAVVYQLMTNGSLDTWLHPVAQDGRQVEESQRLGLVQRINIAIDVACAIDYLHHQNPRKIIHCDLKPSNILLDADMTAHVGDFGLVRFLSEPSITNESSSVGVKGTIGYAAPGKRPTDAIFERGLNLHSHARMALPDQVMAIVDPLLLNNGTEDSINKACLESLVRIGVSCSVELPQERMDTRDVIVELQKIKDRLVKRGRSGR 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1590 976 FunFam LRR receptor-like serine/threonine-protein kinase EFR 332 637 - -
Glsi10g1590 976 Gene3D Ribonuclease Inhibitor 175 330 IPR032675 -
Glsi10g1590 976 SUPERFAMILY L domain-like 26 320 - -
Glsi10g1590 976 SMART LRR_typ_2 436 460 IPR003591 -
Glsi10g1590 976 SMART LRR_typ_2 487 511 IPR003591 -
Glsi10g1590 976 SMART LRR_typ_2 535 558 IPR003591 -
Glsi10g1590 976 SMART LRR_typ_2 116 140 IPR003591 -
Glsi10g1590 976 SMART LRR_typ_2 236 260 IPR003591 -
Glsi10g1590 976 SMART LRR_typ_2 188 212 IPR003591 -
Glsi10g1590 976 SMART LRR_typ_2 92 115 IPR003591 -
Glsi10g1590 976 ProSitePatterns Protein kinases ATP-binding region signature. 703 727 IPR017441 GO:0005524
Glsi10g1590 976 ProSiteProfiles Protein kinase domain profile. 697 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1590 976 Pfam Leucine rich repeat 490 548 IPR001611 GO:0005515
Glsi10g1590 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Glsi10g1590 976 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 65 331 - -
Glsi10g1590 976 FunFam LRR receptor-like serine/threonine-protein kinase EFR 668 779 - -
Glsi10g1590 976 Gene3D Transferase(Phosphotransferase) domain 1 780 884 - -
Glsi10g1590 976 Gene3D Phosphorylase Kinase; domain 1 661 778 - -
Glsi10g1590 976 Gene3D Transferase(Phosphotransferase) domain 1 885 966 - -
Glsi10g1590 976 SMART serkin_6 697 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1590 976 Gene3D Ribonuclease Inhibitor 331 639 IPR032675 -
Glsi10g1590 976 SUPERFAMILY Protein kinase-like (PK-like) 674 960 IPR011009 -
Glsi10g1590 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 263 961 - -
Glsi10g1590 976 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Glsi10g1590 976 Pfam Protein kinase domain 699 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1590 976 SUPERFAMILY L domain-like 336 621 - -
Glsi10g1590 976 Gene3D Ribonuclease Inhibitor 26 174 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1590 Glsi-ChrGlsi10 10645940 10649056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1590 21 974 Receptor kinase-like Gene Family AT3G47570 42.488 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi10g1590 Pkinase 3.2e-28 CL0016