Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1582 ATGAGACACGCCTCACGGTTGCCACTGCACTCTGCCATGGCCACCACTGCCACAGCTGCCGCCACGTCATACTTCTTTGGTTCCCGTCTCAACAACAACCCCGCCTCCAACTCTGGCAGATTCCAGGCCCTTCTCGGATTAGGTACCAAGACCAAGAAGGCTCCGCCACCCCCCAAAAAGGCGACGCCAAAGCCCAAGGGAGATCGACTTGTGTGGTTCCCGGGGGCGCAACCACCCGAATGGCTGGACGGAACCATGGTGGGAGACCGTGGGTTCGACCCATTTGGGTTGGGGAAGCCCGCCGAGTACTTACAGTTCGATTTGGATTCGCTGGACCAGAATTTGGCGAAGAATGAGCCCGGGGGACTCATCGGAACCAGATTGGAGACCGCGGAGGTTAAACCGACGCCATTCCAGCCGTACACGGAGGTGTTCGGGTTGCAGAGGTTCCGCGAGTGCGAGCTGATTCATGGAAGATGGGCAATGCTGGGAGCACTCGGTGCCTTGGCTGTTGAGGCTCTCACTGGGGTTGCATGGCAAGACGCTGGAAAGGTAGAGCTGGTGGAAGGGTCATCCTACCTGGGACTTCCTCTTCCATTCTCATTGACCACATTGATCTGGATTGAGGTCATACTGATAGGCTACATTGAATTCCAAAGAAATGCAGAGCTTGACCCAGAAAAAAGGTTATACCCAGGCGGCAAGTTCTTCGATCCCCTGGGGTTGGCCAATGATCCCGAAGAGAAGGCCAGACTTCAACTGGCAGAGATCAAGCATTCCCGGTTAGCTATGGTGGTTTTCTTCATCTTTGCAATTCAAGCTGCTGTAACTGGAAAAGGCCCCATCAGTTTTATTGCTACCTTTAATAAGTGA 873 0.543 MRHASRLPLHSAMATTATAAATSYFFGSRLNNNPASNSGRFQALLGLGTKTKKAPPPPKKATPKPKGDRLVWFPGAQPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNEPGGLIGTRLETAEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFFIFAIQAAVTGKGPISFIATFNK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1582 290 SUPERFAMILY Chlorophyll a-b binding protein 68 287 - -
Glsi10g1582 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 24 286 IPR001344 GO:0009765|GO:0016020
Glsi10g1582 290 MobiDBLite consensus disorder prediction 48 70 - -
Glsi10g1582 290 Pfam Chlorophyll A-B binding protein 78 274 IPR022796 -
Glsi10g1582 290 Gene3D Chlorophyll a/b binding protein domain 71 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1582 Glsi-ChrGlsi10 10588908 10590757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1582 25 287 Chloroplast and Mitochondria Gene Families AT3G08940 72.243 5.15e-135 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1582 10 10588908 10590757 Glsi10g1582 10 10588908 10590757 ECH