Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1581 ATGGCTTCTTGGTTGTCACTAGTTTTCTTTGTCATCCTGTCCACCGTCTTCCTATTCCTTCTCAGGAGAAGCCGCTACCGGCGGCTCCGGCTACCGCCGGGGAGCCTGGGGCTTCCCTTTATCGGGGAGACTCTGCAACTTATCTCCGCCTACAAAACCGATAACCCAGAGCCTTTCATCGACCAGCGGGTGAACCGGTACGGCGCGATCTTCACCACCCACGTTTTCGGAGAGCCGACGGTGTTCTCGGCCGACCCGGAAACGAACCGGTTTATTTTGCTGAACGAAGGGAAGCTGTTCGATTGTAGCTACCCCGGTTCGATATCGAACCTGCTGGGGAAGCACTCGTTGCTGCTCATGAAGGGCGCCCTTCACAAGAGAATGCACTCGCTAACGATGAGCTTCGCCAACTCCTCCATCATCAAGGATCATCTTTTGGTTGATATAGACCGGCTGATCCGGCTCAACTTGGATTCCTGGACCGATCGAGTTCTTCTCATGGAGGAGGCCAAGAAGATAACGTTTGAATTAACAGTGAAGCAGCTGATGAGCTTTGATCCAGGGGAGTGGACGGAGAGTCTAAGGAAAGAGTACGTTATGGTTATAGAAGGGTTCTTCACCCTCCCTTTACCTCTCTTCTCCAACACCTACCGCAGAGCCATCAAGGCAAGAACCAAGGTTGCAGAGGCACTCACCTTGATAGTCAGGCAGAGGAGAAATGAGATTATCTCTGAAAAGAACAGATCAGACATGTTGGGAGCACTCATGGCCTCCGGCGACCACTTCTCCGACGAGCAGATTGTGGATTTCATGCTGGCTTTGCTTGTCGCCGGCTACGAAACCACCTCTACCATCATGACTCTCGCCATCAAGTTCCTCACCGAGACTCCTCTGGCCTTGGCACAACTCAAGGAAGAGCATGAGCAGATCAGAGCAAAGAAGGGTGATCCAGAGGCTGCTTTGGAGTGGAGCGATTACAAATCTATGGCATTTACTCAATGCATTGTTAATGAGACATTGAGGGTCGCAAACATAATTGGTGGGATTTTTAGGAGAGCCATGACAGACATCAATATAAAAGGTTACACGATTCCTAAGGGATGGAAGGTGTTTGCATCATTTCGCGCTGTACATCTAAACCCAGACCATTTCAAAGACGCCCGCGCCTTTAATCCATGGAGGTGGCAGAATAACTCAGAAGCAGCAAGCCCTGGAAATGTATATACACCGTTTGGAGGAGGGCCAAGGCTGTGCCCTGGCTATGAGCTTGCTAGGGTTGTGCTCTCTGTGTTCCTTCATCGCATGGTCACTCGTTTCAGCTGGGTTCCTGCTGAGGAAGACAAGTTGGTGTTTTTCCCAACCACAAGAACGCGGAAGAGGTATCCTATCATAGTGAAGCGTAGACATGAATCCAGACAATGTAAAGTGGTATGA 1434 0.5049 MASWLSLVFFVILSTVFLFLLRRSRYRRLRLPPGSLGLPFIGETLQLISAYKTDNPEPFIDQRVNRYGAIFTTHVFGEPTVFSADPETNRFILLNEGKLFDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWTDRVLLMEEAKKITFELTVKQLMSFDPGEWTESLRKEYVMVIEGFFTLPLPLFSNTYRRAIKARTKVAEALTLIVRQRRNEIISEKNRSDMLGALMASGDHFSDEQIVDFMLALLVAGYETTSTIMTLAIKFLTETPLALAQLKEEHEQIRAKKGDPEAALEWSDYKSMAFTQCIVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARAFNPWRWQNNSEAASPGNVYTPFGGGPRLCPGYELARVVLSVFLHRMVTRFSWVPAEEDKLVFFPTTRTRKRYPIIVKRRHESRQCKVV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1581 477 FunFam Cytochrome P450 90A1 21 468 - -
Glsi10g1581 477 Pfam Cytochrome P450 207 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 SUPERFAMILY Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PANTHER CYTOCHROME P450 26 28 442 - -
Glsi10g1581 477 CDD CYP90-like 63 467 - -
Glsi10g1581 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Glsi10g1581 477 Gene3D Cytochrome P450 21 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g1581 477 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1581 Glsi-ChrGlsi10 10575391 10578587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1581 120 468 Cytochrome P450 AT5G05690 80.286 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1581 10 10575391 10578587 Glsi10g1581 10 10575391 10578587 CCT
Glsi10g1581 10 10575391 10578587 Glsi10g1581 10 10575391 10578587 ECH