Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1569 ATGAAGAAATCACTCCCCCCCTTCGCCGTCGTCACCGTCAAGGTCAGCCTCGTCGTCGCCGCTGTAATCATCTTATTTATAATTCCTTTAACCCATGCTCTCGGCTCCGGCGCTACCCTCGCCATCAGCGACGGCTCCGACACCGTCTGTGGCATCGTGGCAGAGGAACCGACACGGCGCATTGAATGCTACCGTCGCGGGAAGATCATCCCTGTCCCTCCCAACGTTTCATTTTCGTCTATTTCCGGTGGAAGGAGTTATTTCTGTGGCCTTAGGTCCGGTAACTACAGTTTGCTTTGCTGGGACACTGTCTCTCCCAATGATAGCTTAGTAAGTAAGAGGCTTTATAACAATGATACTGTTCTATTGGAGAATCTGGCGATCGGAGATGACCAAGTATGCGCGACGGTCGTGGGTGTTGGCAAGGTCGAATGCTGGAGAACCAATGGCACATTCCGATTACCATCTAGGTCGGATCAATTCCAGTCGATATCATCTGGGTCTGGCTTTTCTTGCGGAATTTTGAGGAATAGTTTTCTAGTTCGGTGTTGGGGAATTAGGTCCGTCTCAATTGGTATACAGAATGAGTTTGGAAACATGTCCATGTTGAGTCTTGTAGCGGGCGGTTCACATGTTTGCGGATTGAATTCAACTGGGTTTTTGGTATGTAGAGGAAGCAACAGTTCTGGGCAGCTTGATGTTCCCCAGGGAGGACCTCTGGAATATTCTGGGTTGGCACTAGGAGCTGAGCATAGCTGCGCAATTAGAAGATCCAACGGTTCGGTTGTTTGCTGGGGCGGCGGAGGACAATTCTCGGTAAATGTTACGGAAGGAGTTTCTTTTGAGTTAATTGTTTCGGGGTCGAATTTTACTTGTGGATTAACGACAAGCAATTTTTCAGTTATGTGTTGGGGGCCTGGTTGGGCAAATAGTTCTAATTCTAATTCAAGTTTTGAGCTTCCCTTACCTCGTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGCAGCCAGTGTGGTATATATCCTCAATCTCAAACTCTATGCTCAGGTTCTGGTAACATTTGTAAGCCTTGTTGGCCTCAAATTTCAGAACCGGCGCCATCCCCGTCACAACCATCGACACAGCCACCATCCCGATCGTCTCGATCAAAGACCTTGACAAGGGGCTTATTGGCATTCGCCATTGTAGGATCCGTTGGAGCAGCTGCCGGTATTTGCTCAATAATTTATTGCTTGTGGACTGGAGGTTGTTTTGGTAACAAGAAAATCTATAATTCTGTGCAACCCACAATCACTAGAGCTGGTAGTTCAAATGGTGGTGCCATTTCCCACAATAGCCCACCATCGAGATCATCTACAATTAGGCGTCAGGGCTCGAGAATAATGAGGCGGCAGAGGAGTGGAACCTCGTCAACAAAACACCCAGACAGGGCAGAGGAGTTCACCCTAGCTGAACTTGTAGCAGCAACCGACAATTTCTCACTTGAGAACAAGATTGGTGCTGGAAGCTTTGGTGTTGTGTACAGAGGCAAACTAGCTGATGGTCGTGAGGTGGCAATCAAAAGGGGTGAGACAAGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAAAGTGCATTTGAGTCAGAATTGGCATTCTTGTCCCGTCTACACCACAAACACTTGGTTAGGCTAGTTGGTTTCTGTGAAGAGAAAGATGAGAGGCTCTTGGTGTACGAGTACATGAAGAATGGAGCATTATATGATCATTTGCATTTCAGGAACAATGTGGAGAAGGGTAGTAGTTTCTTGAATTCCTGGAAAATGAGGATCAAAATCGCCCTAGATGCTGCTCGAGGAATCGAATATCTCCATAACTATGCAGTTCCACCTATAATTCACAGAGATATCAAGTCTTCAAACATTCTGCTCGACGCAAATTGGACAGCAAGAGTATCTGATTTCGGATTGTCATTAATGGGTTCAGACTCTGACCAGGATTACCGGCCAACAAAGGCAGCAGGAACAGTTGGATACATTGATCCCGAGTACTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTATATGGGCTTGGAATAGTACTGCTGGAACTCTTAACTGGAAAGAGAGCTCTATTCAAGGGAGGCGAAAATGGAGGTACCCCTGTAAGTGTGGTGGACTTTGCAGTGCCTGCAATAATAGCTGGGGAATTAGCGAAAATTTTGGACCCGAGGATTGGACAACCGGAGTTAAATGAAGCAGAGGCAGTGGAGCTGGTGGCCTATACTGCAATGCATTGCGTGAATTTGGAAGGGAAGGATAGACCAACAATGACTGACATTGTGGCCAATCTGGAACGGGCTTTGGCTCTTTGTGATACTAGTCATGGCAGCATTTCCAGTAGTGGTGCAATCTCTATTGTTTCAGAGTGA 2412 0.4652 MKKSLPPFAVVTVKVSLVVAAVIILFIIPLTHALGSGATLAISDGSDTVCGIVAEEPTRRIECYRRGKIIPVPPNVSFSSISGGRSYFCGLRSGNYSLLCWDTVSPNDSLVSKRLYNNDTVLLENLAIGDDQVCATVVGVGKVECWRTNGTFRLPSRSDQFQSISSGSGFSCGILRNSFLVRCWGIRSVSIGIQNEFGNMSMLSLVAGGSHVCGLNSTGFLVCRGSNSSGQLDVPQGGPLEYSGLALGAEHSCAIRRSNGSVVCWGGGGQFSVNVTEGVSFELIVSGSNFTCGLTTSNFSVMCWGPGWANSSNSNSSFELPLPRILPGPCVQSSCSQCGIYPQSQTLCSGSGNICKPCWPQISEPAPSPSQPSTQPPSRSSRSKTLTRGLLAFAIVGSVGAAAGICSIIYCLWTGGCFGNKKIYNSVQPTITRAGSSNGGAISHNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVAATDNFSLENKIGAGSFGVVYRGKLADGREVAIKRGETSSKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHFRNNVEKGSSFLNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGSDSDQDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGIVLLELLTGKRALFKGGENGGTPVSVVDFAVPAIIAGELAKILDPRIGQPELNEAEAVELVAYTAMHCVNLEGKDRPTMTDIVANLERALALCDTSHGSISSSGAISIVSE 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1569 803 SUPERFAMILY Protein kinase-like (PK-like) 470 778 IPR011009 -
Glsi10g1569 803 SMART serkin_6 493 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1569 803 MobiDBLite consensus disorder prediction 435 456 - -
Glsi10g1569 803 MobiDBLite consensus disorder prediction 435 476 - -
Glsi10g1569 803 Pfam Protein kinase domain 494 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1569 803 FunFam Serine/threonine-protein kinase-like protein CCR4 574 795 - -
Glsi10g1569 803 ProSiteProfiles Protein kinase domain profile. 493 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1569 803 Gene3D Phosphorylase Kinase; domain 1 454 573 - -
Glsi10g1569 803 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Glsi10g1569 803 CDD STKc_IRAK 499 780 - -
Glsi10g1569 803 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Glsi10g1569 803 Gene3D - 30 196 IPR009091 -
Glsi10g1569 803 Gene3D - 197 372 IPR009091 -
Glsi10g1569 803 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 199 788 IPR044815 GO:0004674
Glsi10g1569 803 SUPERFAMILY RCC1/BLIP-II 33 269 IPR009091 -
Glsi10g1569 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Glsi10g1569 803 FunFam serine/threonine-protein kinase-like protein CCR1 462 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1569 Glsi-ChrGlsi10 10496401 10498812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1569 9 803 Receptor kinase-like Gene Family AT3G55950 62.031 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi10g1569 Pkinase 1.5e-45 CL0016