Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1567 ATGGCTGTCTCCGACGTCGAAGCTGTCATACAGTTCTTGAGGAAGAACGGATTTTCAGAGGCGGTGTCTGCCCTCAAAGAGGACATCATCGAAAAGGGTGATTTGGGATCCTTTGACTTTGAGAAATTCTTATTCCCAATGGTGCCGCCACCCCCACCGGTCAGAGTCCGATCGTTTTCCCTGCTTTCAGGGGCGCCTGATTCGTCGGAAGATGAGTTCGTGAGCCTGGGTTCATCAACTTCCCATGTTTGTTCCTCAGAATTCATCAATCCATATGGAATCCGTTCTTCATCTCTGACTCAGAATGATTCTGAATCTTCATCTGATAGATTATCTCAATTTGGAACGGCACGTGATTACCACGAATTCGATATGCAAAACGAATCACATTGGTACAATGACAAAGATGATGACAATTTCATGACTCCAAGCTTTAAAGGGCCAGATTTCTTTGGCTGTCAAAGTGAGGATAAGTTTGTAATGACATCAGAAACTGAGAATCCTCTTGGCCTCAGTTACGTCTGTGAAGGATTTCATTTAGAGGGAAATGGTGATTGCATGAACAAGGTGTGCCTTTTTAATCATTCCTCTATAGGGGATGAAAATTTAATCTACTCCAAAGGCTATGCTCCCACCGATAAGAAAGACCAGCTTGAAGGAGGATTATTGGCGAACACCAAGAAACTTGCTCTTGCCAATAGTTGTGAAGTCCCAATTTGCAAAAACTCTGCAGTTTCAGGAGGGTCTTGTGGTGGGCATCCTGCGGACTACAGTTACCCTAGTTTGAAGGAAATCCATCTGAATGCTTTTCACTCAAAGTTTGTCGGGGATGTATCTACTTTTGATGCTGCTCCAGAGAATAATAGGAACCAAACTTTCGACTACTACCCTAACGATGACAGCACTAGGGGTTATAAAGGTTCCTATGACTTGACTATCAAAGTTTCTGAAACAAATATACTAAATGGACTTGACAGCTTTGAAGCTCGAGATGGTAGAGAATTAACCGAAGAATGCCAAGAATCAGATGTTGTTGCAGATGGAGAGGATATTACTGATGACGAGCTCCTCAAGTATTCTCGTAAGGATGACTTTGAAGTATTTGACCTCAGAATTATTCATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGATATGCCCATTGTCCTAAATACAGTCATAGCAGGTAGATACTATGTAACAGAATATCTTGGTTCTGCAGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCGGACAGGAATAGATGTTTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTGTCAATAAGCATGACCCAGCTGATGAACGCCACATATTGCGTCTTTATGACTACTTCTATCATCAGGAACATCTATTCATTGTCACTGAGCTTCTGCGGGCAAACCTGTATGAATTTCTGAAATTCAATCAAGAATCTGGTGGCACAGCATATTTTACGCTGAAGAGATTGCAGAACATTACTCGTCAGTGTTTGGAGGCATTGCAATACTTGCACAGCCTGGGAGTGATTCACTGTGACCTGAAGCCAGAAAATATTCTAATAAAAAGCTACAGAAATTGTGAGGTAAAAGTTATTGATCTGGGAAGCAGTTGCTTTCAAACAGACAATTTGTGCCTATATGTACAATCTCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCGTCCAGTATGATGAGAAGATTGATATATGGTCCCTTGGCTGTATCTTAGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCAGTTGTGATGATTCTTGCACGCATGATTGGAATGCTTGGCCCTATTGATCTCCAGATGTTGGTGTGGGGGCAGGAAACACACAAGTACTTCACCAAAGAATACGATATTTATTATGTTAACGAGGAGACAAATCAAGTGGAGTACATAATTCCCGAGGAAACATCATTGGAGCAGCACCTGCAGGTTACTGATACAATGTTCATCGACTTTGTCAGATACTTGCTTACCATCAACCCGCAAAGACGGCCTTCTGCAAGACAGGCACTAAAGCATCCATGGCTTTCCTATGTCTATAAGTCCAAGTAG 2127 0.417 MAVSDVEAVIQFLRKNGFSEAVSALKEDIIEKGDLGSFDFEKFLFPMVPPPPPVRVRSFSLLSGAPDSSEDEFVSLGSSTSHVCSSEFINPYGIRSSSLTQNDSESSSDRLSQFGTARDYHEFDMQNESHWYNDKDDDNFMTPSFKGPDFFGCQSEDKFVMTSETENPLGLSYVCEGFHLEGNGDCMNKVCLFNHSSIGDENLIYSKGYAPTDKKDQLEGGLLANTKKLALANSCEVPICKNSAVSGGSCGGHPADYSYPSLKEIHLNAFHSKFVGDVSTFDAAPENNRNQTFDYYPNDDSTRGYKGSYDLTIKVSETNILNGLDSFEARDGRELTEECQESDVVADGEDITDDELLKYSRKDDFEVFDLRIIHRKNRTGFEESKDMPIVLNTVIAGRYYVTEYLGSAAFSKVVQAHDLRTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADERHILRLYDYFYHQEHLFIVTELLRANLYEFLKFNQESGGTAYFTLKRLQNITRQCLEALQYLHSLGVIHCDLKPENILIKSYRNCEVKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGVQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLQMLVWGQETHKYFTKEYDIYYVNEETNQVEYIIPEETSLEQHLQVTDTMFIDFVRYLLTINPQRRPSARQALKHPWLSYVYKSK 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1567 708 PANTHER DUAL SPECIFICITY PROTEIN KINASE 101 701 - -
Glsi10g1567 708 CDD PKc_DYRK_like 399 701 - -
Glsi10g1567 708 FunFam Putative serine/threonine-protein kinase dyrk2 393 480 - -
Glsi10g1567 708 Pfam Protein kinase domain 401 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1567 708 FunFam Serine/threonine-protein kinase ppk15 478 702 - -
Glsi10g1567 708 Gene3D Transferase(Phosphotransferase) domain 1 453 701 - -
Glsi10g1567 708 SMART serkin_6 399 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1567 708 Gene3D Phosphorylase Kinase; domain 1 394 480 - -
Glsi10g1567 708 ProSiteProfiles Protein kinase domain profile. 399 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1567 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Glsi10g1567 708 SUPERFAMILY Protein kinase-like (PK-like) 388 704 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1567 Glsi-ChrGlsi10 10475330 10479368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1567 396 696 MAP Kinase Gene Family AT5G19010 30.841 9.76e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Glsi10g1567 Pkinase 3.8e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1567 10 10475330 10479368 Glsi10g1567 10 10475330 10479368 ECH