Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1552 ATGGGAAGCTCTGTGCAGGTCAAAGAAGCTTTGGTGATTACCCCTTCTGAGCCAACCCCTGCTCGTGTTTTCACTCTCTCTGCTCTTGACTCCCAACTCTTCCTTCGTTTCACTATAGAGTACCTCTTAGTCTACAGAGCCTACCCTGGCATGGACCAGAAGGCCACCTCGGCTTCTTTAAAAACAGCATTGGCCAAAGCTTTGGTTCCCTATTACCCATTCGCCGGGAGGGTCAGGACTAGACCCGATGGCTCCTGCCTTGAGATAGTGTGTCGAGCCCAGGGTGCCCTGTTCATAGAAGCCTTTTCTGATCGTTACTCCATCAGCGACTTCGAGAAAGCCCCCAAAACAGTGACCCACTGGAGGAAACTCTTGTCCCTCCACGTCGCTGACGTTCTCAAAGGGTCGCCGCCGCTGGTGGTTCAGCTGACTTGGCTCAGAGATGGTTCTGCCGCCGTCGGCATTGGGATCAACCATTGTATTTGCGACGGTATCGGAAGCGCTGAATTTCTCAATCATTTTGCCGAGTTAGCTTCTGGTAAATTCACAATCCTCACCCAATTGAAACCCAAACCCGTTTGGGATCGCCACCTTCTCAATCCATCTCCCTCGAACCCCGCTCGGACCAACCCAACAATCCTCCCCGAGTTCAACCGAGTTCCCGATCTTTGTTCGTTCATGACTCGGGTTTCGAGCGAGCTTAAACCAACCTCCGTTACCTTCGACAAAAGGCATCTCAACGAGCTCAAGAACATCGCTCTCTCCACAAGTCGACCCAGCGAGTTGTCGTACACGTCCTTCGAGGTGCTCGCAGCTCACGTATGGAGGAGCTGGGCGAGAGCTTTGAGGTTCCCTTCAAATCAAACACTGAAGCTGCTCTTCAGCATCAACGTACGGAACCGGGTTAAACCGAGTCTACCCGACGGGTACTACGGGAACGCGTTTGTGCTAGGATGCGCTCAGAGCAGCGCAAAGGAGTTGGTGGAGAGGGGTGTGGGGTATGGTTCGTGTTTGGTGAAGAGGGCGAAGGAGAGGGTGGATAACGAGTACGTGAGGAGGGTGATTGAGTTGGTGTCCGAGTTGAGAGCGAGTCCGGACTCAGTGGGGGTGCTGATAGTGTCGCAGTGGTCGAGGCTGGGATTGGAGAGGATTGACTTTGGGCTGGGGAAGCCACTGCACGTGGGATCCATATGCTGCGATAGGTACTGTCTGTTTTTGCCAGTGAAGGATCAGAGGGAGGCTGTGAAGGTGATGGTGGCTGTTCCCACGCCTACCGTTAACGAGTACATCGCATTTATGAGAACCCACTAA 1311 0.5347 MGSSVQVKEALVITPSEPTPARVFTLSALDSQLFLRFTIEYLLVYRAYPGMDQKATSASLKTALAKALVPYYPFAGRVRTRPDGSCLEIVCRAQGALFIEAFSDRYSISDFEKAPKTVTHWRKLLSLHVADVLKGSPPLVVQLTWLRDGSAAVGIGINHCICDGIGSAEFLNHFAELASGKFTILTQLKPKPVWDRHLLNPSPSNPARTNPTILPEFNRVPDLCSFMTRVSSELKPTSVTFDKRHLNELKNIALSTSRPSELSYTSFEVLAAHVWRSWARALRFPSNQTLKLLFSINVRNRVKPSLPDGYYGNAFVLGCAQSSAKELVERGVGYGSCLVKRAKERVDNEYVRRVIELVSELRASPDSVGVLIVSQWSRLGLERIDFGLGKPLHVGSICCDRYCLFLPVKDQREAVKVMVAVPTPTVNEYIAFMRTH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1552 436 Pfam Transferase family 4 424 - -
Glsi10g1552 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 422 - -
Glsi10g1552 436 Gene3D - 226 429 IPR023213 -
Glsi10g1552 436 Gene3D - 3 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1552 Glsi-ChrGlsi10 10361506 10362816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1552 5 433 Monolignol Biosynthesis Gene Families AT5G48930 27.252 3.30e-44 158