Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1551 ATGGTTAAAGTTGTCATTTTCTGGCGTTTTAACCGGGAGTCGTCGACCAAACGCAAGCAAACCGCGATCATAAAACGACATACGCTGTTCAACTTCAAACTGTTACAAACGCGTACCAAAGTCGTTCCCTCCAATCCCAGCCTTACGGCAGCTGACGTCACCGCCGGTCACAATGCGCGGCCAAGGCCATTTGCTCCCGAGGGGTCCGAATCCGATGCTTCGCTTCCCACCCAAACTCCCACTCCCAATTCTCCGTTTATATCCTTTCCACCTCACTATCCCCATCATCACCTTCACCTCCGGTGTACCTTTCCATCTTCCTTTCCCTTCCCGGATACATTCATGAACCGCTCCAACCCGAGTCGGCCTCATCACGGCGGCCGAGAGGACTGTTGGAGCGAGGGTGCCACCGAGACATTAATCGAGGCCTGGGGTGATCGTTACATCCAGCTCAAACGTGGAAATCTCCGTCAGAAGGACTGGACGGAGGTTGCCGACACCGTCAACGCCCGTCAAAATGGCGTCAAGCCTCGCAAGACCGACATTCAGTGCAAAAACAGGATCGACACCCTCAAGAAGAAGTTCAAGGTCGAGAAGTCGAAGCCGCCTCCGTCCAAGTGGGTCTTCTATCACCGTCTCGATTCTCTGATCGGCGCTCACGCAAGCGTCCCTGACAAGAAACCCACCACCGTCACTTTAACCATCAAATCCTCTAGGCCGAGACCCAGCCCCGCCCCGATTCGTGGGTCAGCTCTGGCGCTCCATTCCGGTGGATCTTCGAGGCTGGATTCCGGTGGTGTGTCTATGGAGAGTTCACTTGGGGACGACGACGACGACGACGACACTGATGATTTGGGGGTTGACGGGAGAGCCGCGAGGAAGCAAAGATTTGAGACGGTTGATTTTTCTGATGGAGCTGCGTTAAGAGAATTGGCGAGGGCGATTCTCAAGTTTGGGGAGATTTATGAGAGAATCGAGAGCTCGAAGCAGCAGCAGATGATCGAGTTGGAGAAGCAGAGAATGGAGTTTACTAAGGATCTCGAATTTCAAAGAATGAACATGTTCACAGATACTCAATTGGAGGTGGAGAGAATGAAGCGCCCCAAGTATGCCACCACCTCAGGTCACGAAGCTCATCAGTTTCCAGCAGTTGCTAGCATCTATAGTAAATCATTCATGGAGTTTTTATTTATATAA 1197 0.5213 MVKVVIFWRFNRESSTKRKQTAIIKRHTLFNFKLLQTRTKVVPSNPSLTAADVTAGHNARPRPFAPEGSESDASLPTQTPTPNSPFISFPPHYPHHHLHLRCTFPSSFPFPDTFMNRSNPSRPHHGGREDCWSEGATETLIEAWGDRYIQLKRGNLRQKDWTEVADTVNARQNGVKPRKTDIQCKNRIDTLKKKFKVEKSKPPPSKWVFYHRLDSLIGAHASVPDKKPTTVTLTIKSSRPRPSPAPIRGSALALHSGGSSRLDSGGVSMESSLGDDDDDDDTDDLGVDGRAARKQRFETVDFSDGAALRELARAILKFGEIYERIESSKQQQMIELEKQRMEFTKDLEFQRMNMFTDTQLEVERMKRPKYATTSGHEAHQFPAVASIYSKSFMEFLFI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1551 398 MobiDBLite consensus disorder prediction 46 85 - -
Glsi10g1551 398 Coils Coil 322 342 - -
Glsi10g1551 398 Gene3D - 132 197 - -
Glsi10g1551 398 Pfam Myb/SANT-like DNA-binding domain 129 216 IPR044822 -
Glsi10g1551 398 MobiDBLite consensus disorder prediction 228 287 - -
Glsi10g1551 398 FunFam trihelix transcription factor ASIL2 132 197 - -
Glsi10g1551 398 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 93 367 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1551 Glsi-ChrGlsi10 10356269 10359290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1551 128 362 Trihelix Transcription Factor Family AT1G54060 38.060 2.16e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi10g1551 Myb_DNA-bind_4 5e-24 CL0123