Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1537 ATGGGTGGAAATTCCCCTTGTGCTTCCTGCAAGTTGCTCAGACGCCGATGTGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCCAATGACCCCCAGAAGTTTGCCATTGTTCACAAGATTTTTGGCGCTAGCAACGTTGGCAAAATGCTGCAGGAACTTCCCGTTCACCAGAGAGCAGATGCAGTGAGCAGCCTAGTGTATGAAGCAAATGCAAGAGTTCGAGACCCAGTTTATGGGTGTGTAGGAGCCATATCCTATCTGCAAAACCAAGTTTCAGAGCTTCAAATGCAGCTGGCAGTAGCACAAGCAGAGATACTCTGCATCCAGATGCAGCACGAGCCAGAGCCAGTGATGCCAAACCCAGAAACTGAGCCAGATCAGAAATCTTACCTTCTCCCAAATGAACAACTCCCTCAGTACCTCCATTTTGCCTCATCCAGCAATGTAATTCATGACTCTCTCAAGACAGAGAGCATTTTCGGGCATGACATGGTTTCTTGA 504 0.4762 MGGNSPCASCKLLRRRCAKDCIFAPYFPSNDPQKFAIVHKIFGASNVGKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPEPVMPNPETEPDQKSYLLPNEQLPQYLHFASSSNVIHDSLKTESIFGHDMVS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1537 167 Coils Coil 85 105 - -
Glsi10g1537 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 125 - -
Glsi10g1537 167 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Glsi10g1537 167 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1537 Glsi-ChrGlsi10 10313259 10313924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1537 3 115 AS2 family AT2G30130 91.150 3.42e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi10g1537 LOB 3.1e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1537 10 10313259 10313924 Glsi10g1537 10 10313259 10313924 ECH