LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi10g1531	ATGGCGAATGAAGGAGGCAGTGGAATCGTTTCCATTAGCGTAGACGACAAAGGGAACTTGAAAATTTGCGTTTACAATGACAGAACTGTGGGTTCTAATGGCGTTTGGTTTGGAGATAATCCATTCCACTTTGTACTTCCCGTCACGTTAATGCAAGTGTTCATGGTCGTTGTACTTACGGAAGCGCTATACTTTATTTCCAGGCCTCTAAGAACACCCAAATTCGTCTGCGCCTCCTTGGGTGGCATTATCTTGGGGCCTTCTCTTCTGGGGAAAAACAAGACAATTAGGTCTCATTTGTTCCTGCCAAGACAAATTGACGCCTTACAGGTAGCGTCTCTAGTGGGAGTTATATACTACATTTTCATTATTGCACTGAAAATGGACTTAATCATGACCTTAAGATCAGCAAAAAGAACATGGAAGCTTGGTTTAATACCCTTTATGTTTAGTTTTTGGGTTATGATAGGCCTTTTCTCTGTGTATCATCCTCAAGACTTCCCTGGTATTTCAACGGTTGTTGAACGCATCATATTCTGTGGTAATTCCTCATTCAGTAATTTCGCCGTAATTTCCCAGTCGTTGCTGGATTCTAACCTTATAACCTCCGAATTAGGGCAGATTGCTTTGTCTTCAGCCATGGTGAATGACATAGTACACGCGATCTATATAGTGTTCATGTATCTCCAAATGAGTAAAGGTGGAAAACAATCATTCTTTTTTATTTTGTTAACCTTTTGGGCGTTTATGTTTTGCTGCATATTCATTATACGCCCAGCTATGTTGATGATTGCAAGAAGAACGCCCATTGGAAAACCAGTTAGAAAAGCATACTTGGTGTTTATACTACTAGGTGTGATTGTTATGGCATTCATCACTGACTTCATTGGCCTCTCATTCCTTTATGGACCTCTATTTTTCGGTTTGGTTACGCCCAATGGACCACCTTTAGCCACAACAATAATAGAGAAAACTGAAGTTATAATCCAAGAGTTTTTTCTGCCTTTGGCCTTCGCTTATTTAGGCATCAAAGTAGATGTGTTTACTCTCCAGAATTTGGGGATGATCATAAGGGTTCACTTCATCGTAATCGCCGGATACTTAGCCAAGATTCTTGCCTGCATTGTGATTTCACTAACATACAAAATAAAGCTCAAACATGGCCTAGTGCTCGGTCTCATACTCAACATGAAGGGTATTATGGAGCTCCTCATTTATAGCCGAATGAGGAAAATACAGCTTTTGGATGATCAAATATTCTGTTACCTAACGTTCTGTGTGCTGGGGATGACTGCAATTCTCACACCCTGCATTGAATTGTTATATAAGCCTCATACTCGATTGGACAATTTTACAACACACGCTCAGATAAGAACGATCCAAAACACTTACGGAAACTCAGAGTTTCGCGTCATTGCTGTTGTACATAACGAAGGAAATGTACGCAGCATCATTTCCCTCATAGAAGCCTGCAACCCAATGCTATCAAGCCCCATTTGTGCCTACGTGATTCATCTTGTTGAGCTCCTGGGCAAAAGCACGCCTTTTCTCCTCCCTGTGGACTTGACCAGGAGAAGATTCTCGTCTTTCAATTTCCCACTTACTAACCACATCATGCGTGCCTTTGACAATTACTCTTGCAACTCCGACGGCCTGATCACCATTCAGCCTTATATCAATGTGGCACCTTTCAAGAACATGCACGAGAAGGTATGCAACCTTGCTCAAGACAAGTTGGTTTCTTTCCTCATTATTCCCTTTCACGAAAATGATCAAACACGTGGTACCGACACCACCGTGTCCCTTCGTGATCTCAACTCTAACTTCCAAGCTTATGCACGGTGCACGGTGGGGATCCTCGTGGATAGGTACTCCCAGCTGAGCATGGGCACCTCCGATTTCTATTTCCATGTGGGAATTTTCTTCGTAGGCGGACCTGATGATCGGGAAGCACTGGCATTGGGGAATCGAATGTCGGAGCGTATGAACATGAGGGTCACGGTTTTCTGGTTTGTCTTGAAGAACAGCAATATGAGTTTTAGTAGTAAGGATGAAATGTTTGAAAGGCAATACAAAGAAGAAAATGAATGGGTAGACAGCATGTTGGACGAGAGTTACATCGATGAGTTTAAGGCTAAGAACATCGGGAATGGCAACGTTGTTTGCCAGAAGATAATGGTGGATGATTGCTTAGGAATAATTGAAGCCATTCGGGGTTTGGAGGGGAACTATGACCTTGTGATTGTGGGGAGGAAACACAATATCGAAACTTTCAACGACAGGGAAATGTCGACTTTTATGGAGAATGTGGAGATCTTGGGAATGTTTGGTGATATATTGGCTTCGACAGAGTTCTGTAATGGGATGATTCCAGTATTGGTGGTGCGGTGTGGCATGAAGCCAGCAGAAAGTAACATTTATAGGGTAGATTCAGTTGCGGCCTCCCACAGGAGTCTTTGTTGA	2463	0.4259	MANEGGSGIVSISVDDKGNLKICVYNDRTVGSNGVWFGDNPFHFVLPVTLMQVFMVVVLTEALYFISRPLRTPKFVCASLGGIILGPSLLGKNKTIRSHLFLPRQIDALQVASLVGVIYYIFIIALKMDLIMTLRSAKRTWKLGLIPFMFSFWVMIGLFSVYHPQDFPGISTVVERIIFCGNSSFSNFAVISQSLLDSNLITSELGQIALSSAMVNDIVHAIYIVFMYLQMSKGGKQSFFFILLTFWAFMFCCIFIIRPAMLMIARRTPIGKPVRKAYLVFILLGVIVMAFITDFIGLSFLYGPLFFGLVTPNGPPLATTIIEKTEVIIQEFFLPLAFAYLGIKVDVFTLQNLGMIIRVHFIVIAGYLAKILACIVISLTYKIKLKHGLVLGLILNMKGIMELLIYSRMRKIQLLDDQIFCYLTFCVLGMTAILTPCIELLYKPHTRLDNFTTHAQIRTIQNTYGNSEFRVIAVVHNEGNVRSIISLIEACNPMLSSPICAYVIHLVELLGKSTPFLLPVDLTRRRFSSFNFPLTNHIMRAFDNYSCNSDGLITIQPYINVAPFKNMHEKVCNLAQDKLVSFLIIPFHENDQTRGTDTTVSLRDLNSNFQAYARCTVGILVDRYSQLSMGTSDFYFHVGIFFVGGPDDREALALGNRMSERMNMRVTVFWFVLKNSNMSFSSKDEMFERQYKEENEWVDSMLDESYIDEFKAKNIGNGNVVCQKIMVDDCLGIIEAIRGLEGNYDLVIVGRKHNIETFNDREMSTFMENVEILGMFGDILASTEFCNGMIPVLVVRCGMKPAESNIYRVDSVAASHRSLC	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi10g1531	820	PANTHER	CATION/H + ANTIPORTER	25	795	-	-
	Glsi10g1531	820	Pfam	Sodium/hydrogen exchanger family	56	436	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Glsi10g1531	820	Gene3D	-	48	449	IPR038770	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi10g1531	Glsi-ChrGlsi10	10246594	10249361	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi10g1531	10	818	Antiporter Super Family	AT2G13620	32.199	3.62e-144	443