Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1526 ATGTTGTCAAGAATCGGCTACAATTGCACTAGCACATTGGCACCTGGCCCTTGTTTATGGGTTTTGGGTCTTTTTGAGCGTTGTGTCTCCTTGGATGTCTTCTGGCATTCTCCTCTGGAGATTGTGGACATGACTCCCACTAAACTGCAGTATCAAGTCATGATCCAATTATGCACAGGGGCCTTCGTGGGGATTGTCCTAATTAATTTTTCTACTCAGTTTCTTGCAAATTGCATGGAGCCACGTATACTTCAACTGTTTACTTCCACATTGATTGTTTTTCTCTTCCATATGGTAACGTGGAAGAGCAATTTGATTCCAAATATTTTTCACAACCCTTCTCAGATTTTGCAACTTGGGATGAGAAATGCAGGTGATTGGCACTGTATTTTAGATAAGAAGAAAGAGAAATGGAAGGACCGATCTAAAACCCATTGGTTCCTCTGGATCCACTGCTTGTGGTTTCTTCTGCTCCCCTTTTGTGTGAAGCCAGTTTTGGGTGAAGGGGAGCGTTGGGATGGAGTCGTTGTTACAGAATCAAATTTCTTGGCACTTCAAGCATTCAAGCAAGAGTTGGTTGATCCCAAAGGCTTCTTACGAAGCTGGAATGACAGCGGCTATGGAGCTTGTTCTGGAGGTTGGGCTGGCATCAAGTGTGCTCAGGGGCAGGTTATCGTAATCCAGCTTCCATGGAAGATGTTGAAAGGGCATATCACCGAGAGGATAGGCCAACTTCAAGGGCTTCGAAAGCTAAGCCTTCACGACAACCAAATCGGTGGTTCAATACCTTCAGCATTGGGACTTCTTCCCAACCTCAGAGGGGTTCAACTATTCAACAATCGTTTAACAGGGTCCATCCCTCCTTCATTAGGTTCCTGCCCTTTGCTTCAGTCCTTAGACCTCAGTAACAATTTACTCACAGGGAGAATCCCTGATAGCCTTGCCAATTCTACTAAGCTTTATTGGCTTAATTTGAGCTTCAATTCCTTCTCGGGTTCAATACCAGCTACCCTCGCTCGCTCACATTCCCTCACCTTCCTTTCTCTTCAATACAATAACCTCTCTGGATCTATCCCAAACTCATGGGGTGGAACTCTGAAGAATAACTTCTTTCGTTTTCAAGATTTGATCCTTGATCATAACTTCTTCTCTGGAAGTATTCCTGCTTCTTTGGGTAGCTTAAGCAAACTCAGAGATATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATACCAAATGAAATAGGGAGTCTTTCTAGGCTACAAAAATTAGATTTTTCCAATAATGCCTTGAATGGAAGCTTGCCTGCTACTCTCTCTAATTTATCCTCACTTACTCTGTTGAATGTAGAGAACAACCACCTCGACAACCAAATCCCAGAATCTCTGGGCAGATTACGTAATCTTTCTGTTCTAAGATTGAGCAGAAACCAATTTAGCAGTCACATCCCTGCAAGTATTGGCAACATTTCCACGCTTACACAGCTTGATTTGTCGCTGAATAACCTCAGCGGGGAAATTCCAATCTCCTTTGACAATTTACGTAGTCTTAATCTTTTCAATGTTTCTTACAATAACCTCTCTGGTTCTGTTCCCTCTCTACTTGCCAAGAAATTTAACTCGAGCTCATTTGTTGGAAATATTCAACTATGTGGGTACAGTCCTTCAACCCCATGTACTGCGCAAGCACCATCTTCGGAAGTCTCTGCTCCAAGCCCTGAAGTATCAAAACACCATCATCATCGGAGACCAAGTACCAAAGACATTATTCTCATAGCAGCAGGAGCTCTCCTTATAGTGTTGTTAATACTTTGTTGCATCCTGCTCTTCTGCTTGATCAGAAAAAGATCAGCATCAAAGGCAGAGAATAGCCGGGGCGCAGGACATGCTGGCACTGCCGTAACAGAAAAAGGGGTCCCTGCGGTTGCCGGAGCAATTGAAGCGAGCGGCGAGGCTGGGGGGAAACTAGTTCATTTTGATGGGCCGACGGTTTTTACAGCTGATGATCTCTTGTGTGCGACAGCGGAAATAATGGGAAAGAGCACCTATGGAACTGTGTATAAGGCTACATTGGAGGATGGAAGTGAAGTTGCGGTAAAGAGACTGAGGGAGAAGATCACTAAAAGTCAGAGAGAATTTGAATCCGAAGTTAGTGTTCTAGGGAAGATTCGGCACCCAAATCTTTTGGCACTGAGGGCATATTATTTGGGACCCAAGGGGGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTGCTTTCTTGCATGCTCGTGGGCCAGAAACAGCCATTGATTGGCCAACAAGGATGAAAATAGCACAAGGCATGGCTCGTGGCTTGTTCTACCTTCATTCCCGTGAGAACATCATACATGGGAACCTTACATCCACCAATGTCTTGCTTGATGAAAATGCGAATGCTAGAATCGCAGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAGTTCTAACGTGATTGCTACTGCTGGAGCATTAGGGTACCGGGCGCCGGAGCTTTCAAAGCTCAAGAAAGCCAACACAAAAACGGATGTCTACAGCCTTGGTGTTATCTTGTTGGAACTCCTAACAGGGAAATCACCTGGTGAGGCTATGAATGGCGTGGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTCGACGTGGAGTTGATGAGAGATGCATCTACTATTGGTGATGAGTTGCTAAACACATTGAAGCTTGCTCTGCACTGTGTTGATCCTTCTCCATCAACACGACCAGAAGTTCAGCAACTGCTCCAGCAGCTAGAAGAGATTAGACCAGAGAGATCAATTAGTTCTGGGGAAGATATAGTCATCCCCTCAACCAGTGATTAA 2889 0.4441 MLSRIGYNCTSTLAPGPCLWVLGLFERCVSLDVFWHSPLEIVDMTPTKLQYQVMIQLCTGAFVGIVLINFSTQFLANCMEPRILQLFTSTLIVFLFHMVTWKSNLIPNIFHNPSQILQLGMRNAGDWHCILDKKKEKWKDRSKTHWFLWIHCLWFLLLPFCVKPVLGEGERWDGVVVTESNFLALQAFKQELVDPKGFLRSWNDSGYGACSGGWAGIKCAQGQVIVIQLPWKMLKGHITERIGQLQGLRKLSLHDNQIGGSIPSALGLLPNLRGVQLFNNRLTGSIPPSLGSCPLLQSLDLSNNLLTGRIPDSLANSTKLYWLNLSFNSFSGSIPATLARSHSLTFLSLQYNNLSGSIPNSWGGTLKNNFFRFQDLILDHNFFSGSIPASLGSLSKLRDISLSHNQFSGAIPNEIGSLSRLQKLDFSNNALNGSLPATLSNLSSLTLLNVENNHLDNQIPESLGRLRNLSVLRLSRNQFSSHIPASIGNISTLTQLDLSLNNLSGEIPISFDNLRSLNLFNVSYNNLSGSVPSLLAKKFNSSSFVGNIQLCGYSPSTPCTAQAPSSEVSAPSPEVSKHHHHRRPSTKDIILIAAGALLIVLLILCCILLFCLIRKRSASKAENSRGAGHAGTAVTEKGVPAVAGAIEASGEAGGKLVHFDGPTVFTADDLLCATAEIMGKSTYGTVYKATLEDGSEVAVKRLREKITKSQREFESEVSVLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLAAFLHARGPETAIDWPTRMKIAQGMARGLFYLHSRENIIHGNLTSTNVLLDENANARIADFGLSRLMTTAASSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSTRPEVQQLLQQLEEIRPERSISSGEDIVIPSTSD 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1526 962 Gene3D Ribonuclease Inhibitor 338 434 IPR032675 -
Glsi10g1526 962 SUPERFAMILY L domain-like 218 551 - -
Glsi10g1526 962 Pfam Leucine rich repeat N-terminal domain 183 219 IPR013210 -
Glsi10g1526 962 Gene3D Ribonuclease Inhibitor 435 560 IPR032675 -
Glsi10g1526 962 Gene3D Ribonuclease Inhibitor 179 337 IPR032675 -
Glsi10g1526 962 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 178 366 - -
Glsi10g1526 962 Gene3D Phosphorylase Kinase; domain 1 678 749 - -
Glsi10g1526 962 FunFam Pollen receptor-like kinase 1 749 953 - -
Glsi10g1526 962 CDD STKc_IRAK 678 943 - -
Glsi10g1526 962 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 367 563 - -
Glsi10g1526 962 ProSiteProfiles Protein kinase domain profile. 672 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1526 962 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 374 943 - -
Glsi10g1526 962 SUPERFAMILY Protein kinase-like (PK-like) 676 944 IPR011009 -
Glsi10g1526 962 SMART LRR_typ_2 466 490 IPR003591 -
Glsi10g1526 962 SMART LRR_typ_2 394 417 IPR003591 -
Glsi10g1526 962 SMART LRR_typ_2 245 268 IPR003591 -
Glsi10g1526 962 SMART LRR_typ_2 514 537 IPR003591 -
Glsi10g1526 962 SMART LRR_typ_2 442 465 IPR003591 -
Glsi10g1526 962 SMART LRR_typ_2 269 293 IPR003591 -
Glsi10g1526 962 SMART LRR_typ_2 418 441 IPR003591 -
Glsi10g1526 962 Gene3D Transferase(Phosphotransferase) domain 1 750 955 - -
Glsi10g1526 962 MobiDBLite consensus disorder prediction 562 581 - -
Glsi10g1526 962 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Glsi10g1526 962 Pfam Protein tyrosine and serine/threonine kinase 675 940 IPR001245 GO:0004672|GO:0006468
Glsi10g1526 962 FunFam Leucine-rich repeat receptor-like protein kinase 658 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1526 Glsi-ChrGlsi10 10210779 10215271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1526 172 945 Receptor kinase-like Gene Family AT3G51740 65.894 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi10g1526 PK_Tyr_Ser-Thr 3.6e-44 CL0016