Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1510 ATGTCGCCGGCCGCCAGAGTGAACTTCCCCCTCCTGCCGAAAAGCAAAGCTGCGGTGAAGCCAGCAACTGTCTCTGGCGCCGTTTTCAATGTAGCCACGAGCATAATTGGTGCTGGAATCATGTCAATTCCGGCAACCATGAAGGTTCTGGGTGTAATCCCTGCTTTCACGATGATCCTGGTCATAGCTGTCCTGGCTGAATTATCAGTGGACTTCCTCATGAGGTTTACGCATTCCGGTGAGACGACCACGTATGCTGGGGTGATGAGGGAGGCGTTCGGGCCGGTGGGGGCAGTTGCCGCACAAGTTTGTGTCATGATTACCAATCTTGGGTGTTTGATTATGTACCAAATTATCATCGGGGATGTGCTCTCTGGAAAGTCAACTGAAGGTGAAGTGCATTTGGGCATTTTGCAACAGTGGTTTGGAATTCATTGGTGGACTTCTCGAGAGTTTACCCTGCTCGTGACCGTAGTCTTCATTGTGCTTCCATTGGTCTTGTACCGACGTGTAGAGTCCTTGAAATTCAGTTCTGCAATATCAACTGTTCTAGCAGTGGCATTCGTGGGCATATGTTCTGGGATGTCAATCGCTGCTCTCGTCGCTGGAAAAACGCATTCTCCAAGATTGCTTCCCGAGTTAGATCACCAAACCTCCTTCTTTGATCTATTTACTGCCGTTCCAGTCATAGTCACTGCCTTTACATTTCATTTTAATGTACATCCAATTGGGTTTGAGCTTGCCAAGCCATCTGACATGACGATAGCAGTTAGAATGGCATTAGCGCTTTGCGCTGCCATCTACTTTGCAATTGGCCTGTTTGGGTACCTTCTGTTTGGGGATTCAACCCAGTCAGACATACTAATCAACTTTGATCAGAATACTGGTTCTGCTATTGGTTCCTTGCTCAATAATTTAGTCCGGTTAAGCTATGCATTCCACATCATGCTGGTGTTCCCTCTCCTGAACTTCTCTTTGAGAGCCAACATAGACGAACTTCTCTTCCCCAGGAAGCCTCTGCTAGCCACAGACAACAAAAGATTTGTGACCCTCACTCTGGTGCTGCTAGTCTTCAGCTACCTTGTTGCTATAGCACTCCCAGATATTTGGTACTTCTTTCAGTTTGTGGGATCAACATCTGCAGTGTGCCTTGCCTTCATCTTCCCTGGCTCTGTTGCTCTGAGGGATGCCCACGGTATATCAACAAGAAGCGACAAGACCGTAGCCCTGATAATGGTAGTCCTTGCAGTAATAACAAGTGTGATTGCCATTTCTACCAACGTATACAATTTTTTCAGTAGCAAGACATAA 1311 0.4706 MSPAARVNFPLLPKSKAAVKPATVSGAVFNVATSIIGAGIMSIPATMKVLGVIPAFTMILVIAVLAELSVDFLMRFTHSGETTTYAGVMREAFGPVGAVAAQVCVMITNLGCLIMYQIIIGDVLSGKSTEGEVHLGILQQWFGIHWWTSREFTLLVTVVFIVLPLVLYRRVESLKFSSAISTVLAVAFVGICSGMSIAALVAGKTHSPRLLPELDHQTSFFDLFTAVPVIVTAFTFHFNVHPIGFELAKPSDMTIAVRMALALCAAIYFAIGLFGYLLFGDSTQSDILINFDQNTGSAIGSLLNNLVRLSYAFHIMLVFPLLNFSLRANIDELLFPRKPLLATDNKRFVTLTLVLLVFSYLVAIALPDIWYFFQFVGSTSAVCLAFIFPGSVALRDAHGISTRSDKTVALIMVVLAVITSVIAISTNVYNFFSSKT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1510 436 PANTHER AMINO ACID TRANSPORTER 18 419 - -
Glsi10g1510 436 Pfam Transmembrane amino acid transporter protein 22 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1510 Glsi-ChrGlsi10 10127696 10129639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1510 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.970 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1510 10 10127696 10129639 Glsi10g1510 10 10127696 10129639 CCT
Glsi10g1510 10 10127696 10129639 Glsi10g1510 10 10127696 10129639 ECH