Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1505 ATGGCACGTGTGGAGAGAGAGAGAGGAAGAGGACAAGTTTTGATTGCTGGTTATGAGAAGGGAGAGAGTGGGAAGGAGCCTTCAAGAAAACCCCCCGTGAGCAGAGTTGTTACCAAGAGAAAAAGAAAGCCAGAAAGATCAGAGAAGGAGAGAGAAAAAGATAACCCAAATATGGTTTCTAGAGAGCACAAGAGAGCTGCACTGCATGAGAAGCTTCAACTTCTTCGTTCTATTACTAACTCTCATGCTCTTAACAAAACCTCGATCATAATCGATGCCACAAAGTATATCGAAGAGCTAAAGCAAAAAGTAGAAAGACTGAATCAAGACATAGCCACTGCACAAACTTCAAATGACCAAAATCCTTTGCCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTCCTTGTAAATGTTTTTTCAGCGAAGAATTGCCCAGGTCTGCTTGTTCCCATACTGGAGGCCTTCGAAGAGATGGGTCTTAGTGTAATGGAAGCTAGGGTTTCTTGTACAGACACTTTTCGATTTCAAGCAGTTGGAGGAGAAAATGAAGAAGAAGGTGAGATTATGGATGCACAAGCAGTGACACGAGCAGTAGGAAGAGCTATAAAGAATTGGAGAGAAAGTACTGATCAACATTTTGATGTTGATCAAGGAATCAAGCTTCGTAAGAGTCGCCTTGATAATAATATGTTGCGTCTTCCTTTAGCAGATCAAAGGCATAGGATCGATCATATAAGCATGAGATGTTTGGGGGAAGTTGTGACTGAAGCTGAGATGAGTGAGGGTGATGAATGGAAATGGTGCTTATTTATAGATTAG 822 0.4148 MARVERERGRGQVLIAGYEKGESGKEPSRKPPVSRVVTKRKRKPERSEKEREKDNPNMVSREHKRAALHEKLQLLRSITNSHALNKTSIIIDATKYIEELKQKVERLNQDIATAQTSNDQNPLPMVTVETLEKGFLVNVFSAKNCPGLLVPILEAFEEMGLSVMEARVSCTDTFRFQAVGGENEEEGEIMDAQAVTRAVGRAIKNWRESTDQHFDVDQGIKLRKSRLDNNMLRLPLADQRHRIDHISMRCLGEVVTEAEMSEGDEWKWCLFID 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1505 273 MobiDBLite consensus disorder prediction 41 62 - -
Glsi10g1505 273 Coils Coil 90 117 - -
Glsi10g1505 273 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 30 208 - -
Glsi10g1505 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 120 IPR036638 GO:0046983
Glsi10g1505 273 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1505 Glsi-ChrGlsi10 10099011 10102876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1505 38 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.273 5.04e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1505 10 10099011 10102876 Glsi10g1505 10 10099011 10102876 CCT
Glsi10g1505 10 10099011 10102876 Glsi10g1505 10 10099011 10102876 ECH
Glsi08g0807 08 6113039 6116770 Glsi10g1505 10 10099011 10102876 ECH