Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1501 ATGGTGTCAGCTGAAAAGTCCTTCCGAATCAAGCAGGATGATAGGTTTTTCTCAAGGCTAGTGTCCAAGGAAACCTCCTTGGCCAACTCTTCCTCAAGGGTGTTCTACTATGGAGAAGCTTCAGTTGCAGTTCCTTTCATGTGGGAGTCAAAACCAGGCACTCCCAAGCACTCTTTGTCTCGGACCTCTCTCCCTCCCCTCACACCCCCACCTTCCTACCATTCTAATTCCAAGTCCAACGTCAAGCCAAGAAAATCAAAAGCCCATATTTTCTCAAGGATTTTTGCAGCCGCTAATTTGCATATCAACTCTTACTCATCTCGTCCTTCCTCTCCTTGTCCAATCCCTCAAAGAGAAAGAGGCTGTGGAGTTAATGTCCTTAGCGTAGGGTCAAGTGCTCGATATACAGTGACACTCAGAGCCAATGCAGCAGTAATGGTGGGTTCTGGGTTTCGGTGCACTAATGCAGAAGGATGGGAAAAATTTGATGAGATAGGCAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCGCAAATGGGAAGAAGGCACATGTTGGGTCCTCCTGGAACCCTAAATACTATTACCCCTTGTGCAGCATGTAAGCTCTTGAGACGAAGATGTGCCCAAGAATGCCCCTTTTCTCCATATTTTTCTCCTCATGAGCCCCAAAAATTTGCTTCTGTCCACAAAGTCTTTGGTGCTAGCAACGTCTCGAAGATGCTAATGGAGGTACCAGAGAGTCAAAGAGCCGATGCTGCGAATAGTCTAGTTTATGAGGCCAATGTGAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCGGCTTTGCAACAGCAAGTTCAATCCTTACAAGCTGAACTTAATGCAGTAAGGGCAGAAATACTAAAATACAAACTTAGGGAAGCTAACATGTTACCAATGCTCCCTTCATCTGGCACTGTTTCAATTGCTGCACCACCACCGCCACCTCCTCCTCCTCCTCTTCCTCCTACTTCTTCCTCTTCTTCCATGTACACCCCACAGAGGCCTCCCACCAATTATAGCACAATTTCAAGTGATCATATTTCCTATTTTGGTTGA 1086 0.4604 MVSAEKSFRIKQDDRFFSRLVSKETSLANSSSRVFYYGEASVAVPFMWESKPGTPKHSLSRTSLPPLTPPPSYHSNSKSNVKPRKSKAHIFSRIFAAANLHINSYSSRPSSPCPIPQRERGCGVNVLSVGSSARYTVTLRANAAVMVGSGFRCTNAEGWEKFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREANMLPMLPSSGTVSIAAPPPPPPPPPLPPTSSSSSMYTPQRPPTNYSTISSDHISYFG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1501 361 ProSiteProfiles LOB domain profile. 195 296 IPR004883 -
Glsi10g1501 361 Coils Coil 275 302 - -
Glsi10g1501 361 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 192 327 - -
Glsi10g1501 361 Pfam Lateral organ boundaries (LOB) domain 196 293 IPR004883 -
Glsi10g1501 361 MobiDBLite consensus disorder prediction 55 84 - -
Glsi10g1501 361 MobiDBLite consensus disorder prediction 336 361 - -
Glsi10g1501 361 MobiDBLite consensus disorder prediction 317 361 - -
Glsi10g1501 361 MobiDBLite consensus disorder prediction 317 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1501 Glsi-ChrGlsi10 10065272 10070285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1501 146 310 AS2 family AT2G30340 65.698 6.10e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi10g1501 LOB 1.4e-40 No_clan