Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1495 ATGGAGAAAAGGGGGAATGTGTTGATGCAAAAGTATGAGTTTGGCAGACTATTAGGTCAAGGAAATTTTGCGAAGGTTTACCATGCTAGGGACCTTAGAACGGGTGACAATGTTGCTATAAAGATGATTGACAAGGAGAAGGTTCTAACAGTTGGGCTAGTTGATCAAACAAAGCGCGAAATATCTGTTATGAGACTGGTTAAACACCCCAATGTAACGCAGCTTTATGAGGTCTTGGCCACCAAAACCAAGATTTACTTCATCATGGAATATGCCAAAGGGGGTGAACTTTTCAACAAGGTAGCTAAAGGTAGACTCCATGAGAGCACAGCAAGGAAGTACTTTCAACAATTGATCAGTGCTGTAGATTTTTGCCACGGAAGGGGTGTTTATCACAGGGATTTAAAGCCAGAGAATTTACTTTTGGATGAGAATGGAATTCTCAAGGTTGCAGATTTTGGACTGAGTGCCCTTGTTGAATCTCATCGTCGAGGAAGCTTACTGCATACAACTTGTGGAACTCCTGCATATGTAGCTCCTGAAGTTATAAGTAGAAAAGGTTATGATGGAGCAAAAGCTGACATATGGTCTTGTGGAGTGATCTTATATGTTCTGTTGGCTGGTCATTTGCCATTCTATGATTTGAACCTTATGGCACTGTATAGGAAAATAGGCAAGGCAGATTACAAATGTCCAAACTGGTTTTCATTTGAAGTGCGCAGGCTGTTGGGAAGAATCCTTGATCCCAACCCAGAAACTAGGATTTCCACCACAAAAATCATGGAAAGTTCCTGGTTCAGAAAAGGACTCAATTCCAAAGCTGATAAAATGAAAACCAAAGTTACAGATGTGGTGGGTTCAGTCAATGCTGATGCAAGTTTTGGTTTGTGTGAGAATGAAAGTGGTGGTGCCACTGCTACTGCTGAGGCAAATGAAGCAATGGTCAAACCTACTAATTTGAATGCCTTCGATATAATTTCTCTGTCAGCTGGGTTTGACTTGTCTGGGCTTTTTGCAAGAAACGATGAGAAGAAAGATTTCAAGTTTACATCCCTTCACTCTGCCTCGTCTATCATTTCTTCAATGGAGGATATTGCTCGCATTCTGAGGCTGAAGATAATAAAGAAGGATCGGGGGCTGCTGAAATTGGAGAGACCAAGGGAAGGTAGAAAGGAGGCACTATCCATTGATGCTGAAATATTTGAGTTCACCCCATCTTTCCATTTGGTTGAGATGAAGAAGTCCAGCGGTGATACATTAGAATACCAGAAGATATTGAAGGAGGATATAAGACCAGCTCTCAAAGATATTGTCTGGGCTTGGCAAGATGAGCAGCAACAGCAGTAG 1347 0.4172 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLRTGDNVAIKMIDKEKVLTVGLVDQTKREISVMRLVKHPNVTQLYEVLATKTKIYFIMEYAKGGELFNKVAKGRLHESTARKYFQQLISAVDFCHGRGVYHRDLKPENLLLDENGILKVADFGLSALVESHRRGSLLHTTCGTPAYVAPEVISRKGYDGAKADIWSCGVILYVLLAGHLPFYDLNLMALYRKIGKADYKCPNWFSFEVRRLLGRILDPNPETRISTTKIMESSWFRKGLNSKADKMKTKVTDVVGSVNADASFGLCENESGGATATAEANEAMVKPTNLNAFDIISLSAGFDLSGLFARNDEKKDFKFTSLHSASSIISSMEDIARILRLKIIKKDRGLLKLERPREGRKEALSIDAEIFEFTPSFHLVEMKKSSGDTLEYQKILKEDIRPALKDIVWAWQDEQQQQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1495 448 FunFam Non-specific serine/threonine protein kinase 315 439 - -
Glsi10g1495 448 CDD CIPK_C 321 435 - -
Glsi10g1495 448 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Glsi10g1495 448 SUPERFAMILY Protein kinase-like (PK-like) 8 273 IPR011009 -
Glsi10g1495 448 Pfam NAF domain 317 375 IPR004041 GO:0007165
Glsi10g1495 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Glsi10g1495 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 435 - -
Glsi10g1495 448 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1495 448 Gene3D Transferase(Phosphotransferase) domain 1 3 318 - -
Glsi10g1495 448 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1495 448 FunFam Non-specific serine/threonine protein kinase 6 303 - -
Glsi10g1495 448 Gene3D Kinase associated domain 1, KA1 319 440 - -
Glsi10g1495 448 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Glsi10g1495 448 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1495 448 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1495 Glsi-ChrGlsi10 10038800 10040146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1495 1 447 CBL-interacting serine-threonine protein kinases AT5G58380 63.816 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi10g1495 Pkinase 8.7e-72 CL0016