Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1487 ATGCAACATAGGGTTTCAACTTTCAGCCTGCTGGTCGCGGTGAGGTATATAAAACCCACATCTCTTCCAAACCCTAATCCTATATCCTCTCCCGCAGGCAGCATCCGAATCCCCGAGCTAGAGCCGACCTGCTCAGGAGCATTAGATCTCTCGGCAACCATGACCTTCAAGAGAAGGAACGGTGGACGCAACAAGCATGGCCGTGGACATGTCAAATTCATTCGATGCTCCAACTGCGGCAAGTGCTGCCCTAAGGACAAGGCAATCAAGAGGTTTCTCGTTAGGAACATTGTTGAGCAAGCTGCAGTTAGAGATGTTCAGGAAGCCTGTGTCTATGAACAATACACGCTACCAAAGCTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCTATTCATTCCCATGTCGTGAGAGTTCGTTCTCGCACTGACAGGAGGAAACGTGAGCCACCACAGCGCTTCATCAGGCGCAGGGATGATCTACCAAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGTGGAGCTGGAGTCGCTGCCCGTCCCTAA 552 0.5181 MQHRVSTFSLLVAVRYIKPTSLPNPNPISSPAGSIRIPELEPTCSGALDLSATMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDLPRPGQPGQAPRPAGGAGVAARP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1487 183 MobiDBLite consensus disorder prediction 139 183 - -
Glsi10g1487 183 FunFam 40S ribosomal protein S26 54 167 - -
Glsi10g1487 183 PANTHER 40S RIBOSOMAL PROTEIN S26 54 176 IPR000892 GO:0003735|GO:0005840|GO:0006412
Glsi10g1487 183 Pfam Ribosomal protein S26e 54 158 IPR000892 GO:0003735|GO:0005840|GO:0006412
Glsi10g1487 183 MobiDBLite consensus disorder prediction 143 163 - -
Glsi10g1487 183 Gene3D Ribosomal protein S26e 54 167 IPR038551 -
Glsi10g1487 183 ProSitePatterns Ribosomal protein S26e signature. 126 133 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1487 Glsi-ChrGlsi10 9994002 9996268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1487 54 169 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 2.79e-69 205