LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi10g1482	ATGTTTCTTCTTGTTCTATTTTATCGTCATGGTCCTAGAGAGCATTTGTATGGAGTGAGGCTGATGGATCCTGAATACGGGAAGTGTTGGGACACCTCAAAGAAGGATTCTTGGAAGACTATTCTTCTCTTGGCCTACCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCACCGTTATATGTTTATAAGAGCACATTTGCAGAAGACATTCAACACTCAGAGAGCAATGAAGAGATTTTTGGTGTACTTTCTTTTGTCTTCTGGACCCTGACGTTGGTGCCACTATTCAAATATGTGTTTATTGTCCTTCGAGCTGATGATAACGGAGAGGGGGGTACGTTTGCCCTATATTCCTTGATTTGTAGGCATGCCAAAGTTAGCCTTCTACCCAATCGACAGCTTGCTGATGAAGCGCTCTCGACATATAAGATGGAGCAGCCTCCAGAGAGAAACAGCTCTAGAGTGAAAGTACTACTTGAGAAGTACAAGGCCTTGCATACGGCTCTCCTAATTGTGGTTCTTCTAGGCACTTGTATGGTGATTGGGGATGGACTGCTTACCCCAGCCATTTCTGTTTTCTCGGCAGTATCTGGTCTTGAGTTATCCATGTCCAAGAAACACCACCAGTATGCTGTAATTCCCATCACTTGCTTCATACTGGTGTGTTTGTTTGCACTTCAGCATTATGGTACACATAGAGTGGGATTCTTTTTTGCACCTATTGTGCTGACATGGCTCCTATGCATCAGCACACTCGGCTTATATAATATATTCAAATGGAATCCCTATGTATATAAAGCTCTTTCGCCATATTATATGTTCAAGTTCTTGAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGCGGAATACTATTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATGCGGCTATTCAGACTGCATTCACCTTTCTGGTATATCCAGCACTTATATTGGCATATATGGGTCAAGCTGCTTACTTGTCACACCATCATCATTCCAGTCATGACATCAGTTTCTATGTCTCAGTTCCAGAAAAAGTGAGGTGGCCAGTGCTTGTCTTAGCCATTTTAGCTTCTGTTGTGGGAAGCCAAGCAATTATCAGCGGAACATTTTCCATCATAAACCAGAGCCAGTCACTTGGCTGCTTCCCAAGAGTTAAGGTTGTTCATACATCAGACAAAATACACGGTCAGATCTACATCCCTGAAATTAATTGGATGCTCATGATCCTCTGTATTGCTGTGACCATTGGGTTTAGGGACACAAAACATATGGGAAATGCATCAGGGTTAGCAGTGATGACTGTGATGCTGGTGACGACATGCCTTACTTCCTTGGTGATTATACTTTGTTGGAATAAACCCCCTATTATAGCTCTGTGTTTCCTATTGTTTTTTGGTTCTGTTGAGCTGCTGTATTTCTCAGCTTCGCTGACAAAGTTCCGGGAGGGAGCTTGGCTGCCTATCCTTCTTGCCCTCTTCCTTATGACTATAATGTTCGTTTGGCACTATGCAACCATCAAAAAATATGAATATGACCTCCACAACAAGGTTTCACTAGAATGGCTGTTGGCCTTAGGTCCAAGCTTGGGAATTGCTCGGGTGCCTGGAATAGGTCTAGTATTCACTGATCTTACCTCTGGCATTCCAGCTAACTTCTCCCGATTTGTCACCAACCTCCCTGCATTCCACCGCATCCTAGTTTTCGTATGTGTCAAATCAGTACCAGTCCCTCATGTCACTGTGGCCGAGAGGTACCTTGTTGGCCGTGTAGGGCCTGCTACTCATAGGTCCTACAGATGTATAGTCAGATATGGATATCGCGATGTTCATCAAGATGTTGATTCTTTTGAATCTGAACTAGTAGAAAAGCTAACTGATTTTATACGCTATGATTGGTACCGGACACAAGGGTCCAACGAAAGCATTGAGGATGATGCTTCAAACTCTAATGAATCAACAAGTCACAGACTAACTGTGATTGGAACAATTGGATTCTCCGGGCAGCAAGCTTATGAGATTGAGGAAACAGCAAGTGTCTCTGTTGGTTTCCCAACTGTGCAAAGTGTGACAGATGTAATTGAGATGGAACAAATGGGTGTACCCGTAAGACGAGTGAGGTTTGCCATTGATGACGAGGCCGAAAATGACACAAGGTCCGAAACGGGTGTGCAAATGCAGGAAGAGCTGGAAGATCTTCATGCTGCTCAACAAGCTGGGACAGCATTCATACTCGGGCATTCTCATGTAAGAGCAAAGCAAGGCTCATCACTCTTGAAGAGATTGGGGGTTAACTATGGCTACAATTTCTTGAGAAGAAACTGTAGAGGCCCAGACGTGGCTCTTAAGGTTCCCCCAGTTTCTCTCTTGGAGGTTGGCATGGTTTATATAGTTTAA	2430	0.4374	MFLLVLFYRHGPREHLYGVRLMDPEYGKCWDTSKKDSWKTILLLAYQSLGVVYGDLSISPLYVYKSTFAEDIQHSESNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSLICRHAKVSLLPNRQLADEALSTYKMEQPPERNSSRVKVLLEKYKALHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFFFAPIVLTWLLCISTLGLYNIFKWNPYVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYAAIQTAFTFLVYPALILAYMGQAAYLSHHHHSSHDISFYVSVPEKVRWPVLVLAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWMLMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIILCWNKPPIIALCFLLFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEYDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCVKSVPVPHVTVAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVEKLTDFIRYDWYRTQGSNESIEDDASNSNESTSHRLTVIGTIGFSGQQAYEIEETASVSVGFPTVQSVTDVIEMEQMGVPVRRVRFAIDDEAENDTRSETGVQMQEELEDLHAAQQAGTAFILGHSHVRAKQGSSLLKRLGVNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV	809

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi10g1482	809	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	33	807	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi10g1482	809	Pfam	K+ potassium transporter	46	620	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi10g1482	809	NCBIfam	potassium uptake protein	44	808	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi10g1482	Glsi-ChrGlsi10	9954090	9960091	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi10g1482	22	809	Inorganic Solute Cotransporters	AT2G40540	79.650	0.0	1294