Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1479 ATGACCAGGCCACTCTCCTCAACGATGTCGTTTCCTGACCCCACCTTTCCCTCTCGAGCCCCCTATCACCGACGTTCTCAATCCGAGGTGCATTTCCGGATCCCCGAAGACTTCGATCTGGAACCGGGTCCGTTTGATGATCCCTCTGTCACCTTTGAAGATCTAGGCTCAGAGGATGATCTCCTCTGTGCCTACATGGATTTTGACAAATCCGGATCCAAACTCGAACCTGGATCCTCTCTCCAGAAATCTGCCACCGTGGACAGTAATGGCATGGGTGAGCAGGTGCAGAGTAGCGGCCATGGTGAGAAAGCTGGGAGACCTAGGCATCGGCACAGCAATTCTGTTGATGGATCTTCCGTAATGGAGGCCATTGAGGCTAAGAAGGCCATGGCTCCAGATAAGCTTGCTGAACTGTGGACCGTTGATCCTAAGCGAGCAAAGAGGATTTTGGCAAATCGCCAATCTGCAGCTCGTTCAAAAGAGAGGAAAGCTCGCTATGTATTAGAACTTGAGAAAAGAATTCAAACCCTTCAAACTGAAGCAACTACTCTTTCTGCTCAATTAAATCTTTTCCAGAGAGATACAACTGGTCTGAGTACTGAAAATACAGAACTTAAGCTTCGGTTACAAGCAATGGAGCAACAAGCTAAGTTACGTGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGACAGGCTTAAGATAGCTACTGGAGAGAGAGTAAATCCAACCCAAACCTATAATATGGGAATGCATCAAATTCCACATTCTCAAGCTTCCTTCTTCTTGCGTCAGCCACCGCATGGGTTAGGTGAACCTCAGACCATGCAAATCCAGCAGTTGCATTCACTTTCGTCTAATATGTCAACTCCTCATCAGCCTCTGCTTGGTGTAGGCAACCCACACGATTTGTCAGAAATGTTGCCGCAGGATTCTATTGGCCAATTTCAGGGGCTTGAGATAAGCACCAGGGGTTCTCATCTTCTGATGCCTGATGGTCCCTCCAGTTCGGTTAAACAAATTAGCAGCGCCTTTTGA 1041 0.4745 MTRPLSSTMSFPDPTFPSRAPYHRRSQSEVHFRIPEDFDLEPGPFDDPSVTFEDLGSEDDLLCAYMDFDKSGSKLEPGSSLQKSATVDSNGMGEQVQSSGHGEKAGRPRHRHSNSVDGSSVMEAIEAKKAMAPDKLAELWTVDPKRAKRILANRQSAARSKERKARYVLELEKRIQTLQTEATTLSAQLNLFQRDTTGLSTENTELKLRLQAMEQQAKLRDALNEALKKEVDRLKIATGERVNPTQTYNMGMHQIPHSQASFFLRQPPHGLGEPQTMQIQQLHSLSSNMSTPHQPLLGVGNPHDLSEMLPQDSIGQFQGLEISTRGSHLLMPDGPSSSVKQISSAF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1479 346 FunFam probable transcription factor PosF21 144 197 - -
Glsi10g1479 346 CDD bZIP_plant_RF2 146 195 IPR044759 GO:0003700|GO:0006355
Glsi10g1479 346 Coils Coil 210 230 - -
Glsi10g1479 346 MobiDBLite consensus disorder prediction 73 119 - -
Glsi10g1479 346 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 143 206 IPR004827 GO:0003700|GO:0006355
Glsi10g1479 346 Gene3D - 144 197 - -
Glsi10g1479 346 MobiDBLite consensus disorder prediction 326 346 - -
Glsi10g1479 346 Pfam bZIP transcription factor 145 197 IPR004827 GO:0003700|GO:0006355
Glsi10g1479 346 MobiDBLite consensus disorder prediction 75 97 - -
Glsi10g1479 346 SUPERFAMILY Leucine zipper domain 145 196 IPR046347 GO:0003700|GO:0006355
Glsi10g1479 346 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 295 - -
Glsi10g1479 346 Coils Coil 168 195 - -
Glsi10g1479 346 MobiDBLite consensus disorder prediction 1 30 - -
Glsi10g1479 346 SMART brlzneu 141 205 IPR004827 GO:0003700|GO:0006355
Glsi10g1479 346 MobiDBLite consensus disorder prediction 330 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1479 Glsi-ChrGlsi10 9936413 9939934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1479 12 346 bZIP Transcription Factor Family AT2G40620 53.352 4.23e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g1479 bZIP_1 1.2e-07 CL0018