Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1470 ATGCTTGAAGAATTGATGTATGTATCTTTTGCAAATGCTGCAAATCAAGTAGTGAAGGCAGCGAGGCCTCCTCCATCTACTGGCGGTCTTGTCAGAGAAGCGTTATGTGTTTCTTTTCGTCCTTCTTCAGTTAATATTATTGCAGCCCTCCTTTATTTCAACTGCGTTCCTTACCTTCTGGAACAGAGCTTGTTGTTGCTGTTAAAACGTATGGCTTCTGGGTCTGCAGGTTGTTCTTCACCATATCCGGTCATGGAAACCGGTGTTATACCCCATGTTTTAGCTGTTGATGACAATCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAGGAATTCTTCTTGCAAAGTGACAACTGCAGAAAATGGACCAAGAGCATTGGAGTTCTTAGGCTTGGCAAGTGACGAAGGGAACACCTTGAAGAGCACTGGATCCAAAGTGAATCTGGTTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTCCTTAAGAAAATAAAGGAATCATCTATCATGAAGGAGGTTCCAGTGGTGATCATGTCATCTGAGAACATCCCAACTCGGATTAACAAGTGTTTGGAGGAAGGAGCTCAGATGTTCATTCAAAAGCCCCTCAAACAATCTGATGTAAAGAAACTGACATGTCAGTTGATGAACTGCAGAGGCTAA 675 0.4326 MLEELMYVSFANAANQVVKAARPPPSTGGLVREALCVSFRPSSVNIIAALLYFNCVPYLLEQSLLLLLKRMASGSAGCSSPYPVMETGVIPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLASDEGNTLKSTGSKVNLVITDYCMPGMTGYELLKKIKESSIMKEVPVVIMSSENIPTRINKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1470 224 CDD REC_typeA_ARR 93 215 - -
Glsi10g1470 224 FunFam Two-component response regulator ORR5 91 222 - -
Glsi10g1470 224 Gene3D - 90 222 - -
Glsi10g1470 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR 92 219 IPR045279 GO:0009736
Glsi10g1470 224 ProSiteProfiles Response regulatory domain profile. 92 220 IPR001789 GO:0000160
Glsi10g1470 224 SUPERFAMILY CheY-like 92 220 IPR011006 -
Glsi10g1470 224 Pfam Response regulator receiver domain 93 214 IPR001789 GO:0000160
Glsi10g1470 224 SMART REC_2 91 216 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1470 Glsi-ChrGlsi10 9867713 9871370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1470 69 223 Response Regulator Gene Family AT3G56380 68.590 2.30e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi10g1470 Response_reg 2.8e-21 CL0304