Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1465 ATGCGAGCTCTTCTTTGCCCCGAAACTGTGTCAGCGAAGAGAAAGATAGTGTTCGGAGAGCTTGTTCAGGGTCAGAAGTGTGCTACCCAGCTCAAGTTTCTGCTTCAAAAGCCTTCTGGGGTTGATGGCTCTCTCTCGGGCGCCGATGAGCTTCTGGCCAAAATCCTGAGATCTTTCACCCACACTCTTTCTGTTCTGACCTCTTTTGAGGCCGGTGATAAGGTTCCTCAGAATCTGGTAATTTCTGGTGAAAATGTGTCGCGCGTGGTTGCAACTTCTAGCCATGATCGGAGGTCGGAAGATTCCACCGAGAGTAGGAAGGGATCTTCGCCGCCTCCCAAGAATCGGCGAGGTTGCTACAAAAGAAGGAAGACTGCACAGACTTGGACCATAGTCTCTGACACTCCGAATGATAATCATGCATGGAGAAAGTACGGACAAAAGGAAATCCTTAATTCTAAATTCCCCAGTCTAATGAATTCGCCTTCTTATTTTGATTTTGCAGGAGTTACTTCAGGTGCAGTCGCAAACATCCTCAAGGCTCCGCGAGTGGTCACACATTCTGGTAATTGGGAATCATTCCCTGCGAACCATCCTGACTCAAAGCTATCAAATGAGCAGCCGCATCCTTCGGCGGAGACACCAAGTGATATTGCAGACAACTTGGATCCCAGTTTGTGGTCAGATTTGAAAGTTCTCGAACTATCCGAGGCTGAAATCCTGTCCTCAAACATGGCGTCTTATACTGTGTATTCATGTACTGGCTCTATGGACTTTGGGGTGGATTCTGTTCATTTTGGCACTGATTTCCACTTTGATGAAAGTGATCGGTTGCTCTAG 840 0.475 MRALLCPETVSAKRKIVFGELVQGQKCATQLKFLLQKPSGVDGSLSGADELLAKILRSFTHTLSVLTSFEAGDKVPQNLVISGENVSRVVATSSHDRRSEDSTESRKGSSPPPKNRRGCYKRRKTAQTWTIVSDTPNDNHAWRKYGQKEILNSKFPSLMNSPSYFDFAGVTSGAVANILKAPRVVTHSGNWESFPANHPDSKLSNEQPHPSAETPSDIADNLDPSLWSDLKVLELSEAEILSSNMASYTVYSCTGSMDFGVDSVHFGTDFHFDESDRLL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1465 279 MobiDBLite consensus disorder prediction 91 111 - -
Glsi10g1465 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 156 IPR044810 GO:0003700
Glsi10g1465 279 MobiDBLite consensus disorder prediction 90 128 - -
Glsi10g1465 279 Pfam WRKY DNA -binding domain 137 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g1465 279 MobiDBLite consensus disorder prediction 190 214 - -
Glsi10g1465 279 MobiDBLite consensus disorder prediction 190 219 - -
Glsi10g1465 279 Gene3D WRKY domain 116 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g1465 279 SMART WRKY_cls 136 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g1465 279 SUPERFAMILY WRKY DNA-binding domain 131 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1465 Glsi-ChrGlsi10 9850040 9851831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1465 8 231 WRKY Transcription Factor Family AT3G56400 35.526 9.82e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g1465 WRKY 3e-05 CL0274