Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1464 ATGCTTAGAAGCAGGACAACTCCATTGCTCACCATCGGGATGCTATCATCGTCACCGTCGTCTTCCGCTGCCTGTGAAACTAAACTACCCTCCTTTCTCAGATCCTCTTCTCGAAATCCCAAAACCTCTCTTCCTCCTCCTCACTCTCTGTTTTCCAACTCTCAAAATAGCCCTCAAAACATGACGCTTTCAAGATGCTTTTCTGGGGTCAGTAGCCCAGTTCCCATTTCCGGAAAATCCAAAATGGAAGACCGACAACCCGAATCAGATGACCCTCAGTCTCTTGTGGTGGTCTCCTTCTACAAGTTCGCGGATTTCCCTGACCACGCTCATATGCGGAAACCCTTGAAGGGACTCTGTGAAGAACTGCGTATTTCAGGTGGTATTATTCTTGCGCCTGAAGGAATCAATGGCAGCATATGTGGCACTCGTGAGTCAGTGGAGAAGGTTCTCGCATTTATACAAAGTGATAACCGCCTAAAGGGGCTGAGACAGGTGGAATCACCTGTAAGTCCTGAGGAAGAAGCTATCCATCACGGACATAGTTCCAGCTCGCCTCTTGCTGCAGGGGAAGATGCACCCTTCCGATGGGATCATGTGAGGGTTAAGTTGAAGAAAGAGATTGTTACGCTTGGGATGCCTACTGTATCACCTATTGAAAGGGTTGGAAAGTATGTTAGCCCAACAGATTGGAATGCTTTGATTAGTGATCCAGATACAGTGGTGATTGATGTGCGGAACGGCTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCATGTACCACATCATTTCGTGAATTCCCATCTTGGGTGGAGGATCATTTCCTGCTTACCAGAAGTAATCGCCAGCTTCCAACATTTGAGGTAAACAATTCAGGTGAAAGTGCTGAGAAAGAAATGGAGAATTCAGGACAACATATGCCACAACGTGTGGCGATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCTTCAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACTTGGAAGGTGGAATTCTCAAATATCTCGAGGAAGTTCCAAAAGCGGAAAGCCTATGGCAGGGTGAGTGCTTTGTGTTTGACAAGCGAGTCTCTGTGGACCATGGTTTGGTGCAAGGAAATTTCAAGCTTTGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCTCCAGAATATGAATATGGAGTTTCTTGTCCGCACTGTTTTGCACTGAAACCAGAAGAAGAGAAGGAGAGGGCCCGAGCTCGGCAAAGACAATTTGAGAGATGGGGAATCATTGGTGGTCCGGACAAGGGTCGCCGGCCAACATGTAAACCGGATAGTAGCGGTAGAAAACCTAACCAACTTGCACGTTCAGTTTAA 1392 0.4655 MLRSRTTPLLTIGMLSSSPSSSAACETKLPSFLRSSSRNPKTSLPPPHSLFSNSQNSPQNMTLSRCFSGVSSPVPISGKSKMEDRQPESDDPQSLVVVSFYKFADFPDHAHMRKPLKGLCEELRISGGIILAPEGINGSICGTRESVEKVLAFIQSDNRLKGLRQVESPVSPEEEAIHHGHSSSSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVSPTDWNALISDPDTVVIDVRNGYETRIGKFKGAVDPCTTSFREFPSWVEDHFLLTRSNRQLPTFEVNNSGESAEKEMENSGQHMPQRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPKAESLWQGECFVFDKRVSVDHGLVQGNFKLCYGCKQPVSDADMEAPEYEYGVSCPHCFALKPEEEKERARARQRQFERWGIIGGPDKGRRPTCKPDSSGRKPNQLARSV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1464 463 SMART rhod_4 226 355 IPR001763 -
Glsi10g1464 463 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 85 424 IPR020936 -
Glsi10g1464 463 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 384 IPR036873 -
Glsi10g1464 463 Pfam UPF0176 acylphosphatase like domain 96 208 IPR040503 -
Glsi10g1464 463 Gene3D - 82 209 - -
Glsi10g1464 463 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Glsi10g1464 463 Hamap tRNA uridine(34) hydroxylase [trhO]. 93 395 IPR020936 -
Glsi10g1464 463 ProSiteProfiles Rhodanese domain profile. 236 358 IPR001763 -
Glsi10g1464 463 MobiDBLite consensus disorder prediction 16 57 - -
Glsi10g1464 463 Gene3D - 210 393 IPR036873 -
Glsi10g1464 463 CDD RHOD_YceA 223 351 - -
Glsi10g1464 463 MobiDBLite consensus disorder prediction 166 189 - -
Glsi10g1464 463 MobiDBLite consensus disorder prediction 422 463 - -
Glsi10g1464 463 Pfam Rhodanese-like domain 228 351 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1464 Glsi-ChrGlsi10 9839186 9842388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1464 91 457 Sulfurtransferasese or Rhodanese AT2G40760 77.717 0.0 595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1464 10 9839186 9842388 Glsi10g1464 10 9839186 9842388 ECH