Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1432 ATGAAGACTATTCTTTCATCAGAGACTATGGACATCCCTGATGGGGTGAACATCAAGGTGATGATTGAAGTTAGGAAAGTGGACATGCTTGAAGGTGTTTCCGTTATCCGGTCTGAGAAGGTCAAGGATGAGTTGATTTTGGACGGAAACGATATTGAACTTGTTTCTCGGTCTGCTGCCCTCATTAATCAGGCAACTGAACATGGTCTGATTGATCTCAAATTCTCAATATCAATTTTGCGCCTCATATTCCTCTTTAGCCATGCCCCACGGAACAATTCAACTACTTTATTTTCATTGAAAAATCCAATTTCCTTGTCTGTTTCAGCAGTGTCCAATTCACTATCTAGTCAGATTCTGCATTTTCTGTTCAGGTTAATAATCAGTAGCTCCTAA 396 0.399 MKTILSSETMDIPDGVNIKVMIEVRKVDMLEGVSVIRSEKVKDELILDGNDIELVSRSAALINQATEHGLIDLKFSISILRLIFLFSHAPRNNSTTLFSLKNPISLSVSAVSNSLSSQILHFLFRLIISSS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1432 131 Gene3D - 8 76 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Glsi10g1432 131 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 26 67 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Glsi10g1432 131 SUPERFAMILY Ribosomal protein L6 24 68 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1432 Glsi-ChrGlsi10 9679225 9683478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1432 23 66 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 75.000 1.33e-17 73.2