Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1431 ATGAGAAGTGCGACGGAATGGTTCAGGTCATCGCAGCCTGCATTAAGCATGTTATTAGTGCAAGTTTTTGCAACTGGGATGCAGCTGTTTTCAAGAATCATATTGGTTCAGGGCACTTTCATTTTCGCACTCGTTGCCTATCGCCATATTGTTGCTACAATTTGTGTTGCCCCTTTTGCTTTCTATTTTGAAAGAGGCCGCATTAAGAACTTGAGTTGGTCCGTTTGGTTCTGGCTCTTCCTCAATGCCTTATTCGGGATAATATTGGCTATGGGATTGTTCTATTACGGTCTGCGAGACACCTCAGCTACTTACTCAGTAAACTTCCTCAACTTGATTCCTATATTCACCTTTTTGGTCTCCATCATATGCAGGATGGAGAAACTGGGGTTGCAAACATGGGCTGGTAAAGCCAAGACTTTGGGGGCAATTTTGTGTGTTGGGGGAGCATTAACTACTTGTCTTTACCAGGGCAAGGAGTTCTATATTGGTCATCATAGTCATGACACTCAAACTGCCACTCACAAACACGAAGCTCACATGCTTCAAGGCACCCTCTTTCTAGTTGCTAGCTGCTTGTCATATGCAGCATGGTACATTGTGCAAGTCAAGTTGATGAAAGTATTTCCATTAAAGTATTGGACAACGATGCTAACTTGTATAATAGCATCAATTCAAGCCGCAGTGGTAGGCTCATGCATAGATAGCAGTAAAGCTGCTTGGGCTTTAGGCTGGAATCTGCAATTGGTCACTATAGTATACTCGGGAGCACTGGCTACAGCCGCTACTTTCAGCTTAGTATCTTGGGCAATTGCAGTCAAAGGACCTACTTTTCCCTCAATGTTCAATCCACTGTCTCTTATTTTTGTGGCTATCTTAGAAGCTATTTTACTGGGCGAACCACTGTCAGTTGGAAAGGTGATAGGCATGTTTTTGATCATACTTGGCTTGTACTGCTTTTTATGGGGTAAACAAATAGAGACACGAAACTTGCCTCAACCAAGTGAAGCAACTGTTGAAGTATCCACAGGCATGGCTGCCGAGTCTGTTGGGCGACCATCAACAGCTGTAGTAGTGCCAAGTTCTTCACCTAACAATGCAGTTGTTGAAATTGAAACGACTGACGTAATCAGAAGAAAAGACTAA 1146 0.4328 MRSATEWFRSSQPALSMLLVQVFATGMQLFSRIILVQGTFIFALVAYRHIVATICVAPFAFYFERGRIKNLSWSVWFWLFLNALFGIILAMGLFYYGLRDTSATYSVNFLNLIPIFTFLVSIICRMEKLGLQTWAGKAKTLGAILCVGGALTTCLYQGKEFYIGHHSHDTQTATHKHEAHMLQGTLFLVASCLSYAAWYIVQVKLMKVFPLKYWTTMLTCIIASIQAAVVGSCIDSSKAAWALGWNLQLVTIVYSGALATAATFSLVSWAIAVKGPTFPSMFNPLSLIFVAILEAILLGEPLSVGKVIGMFLIILGLYCFLWGKQIETRNLPQPSEATVEVSTGMAAESVGRPSTAVVVPSSSPNNAVVEIETTDVIRRKD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1431 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
Glsi10g1431 381 PANTHER WAT1-RELATED PROTEIN 12 328 IPR030184 GO:0016020|GO:0022857
Glsi10g1431 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
Glsi10g1431 381 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Glsi10g1431 381 Pfam EamA-like transporter family 14 145 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1431 Glsi-ChrGlsi10 9670155 9673270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1431 1 329 Nodulin-like Gene Family AT5G07050 32.059 9.76e-62 202